ggKbase home page

13_1_40cm_3_scaffold_2794_21

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: comp(16260..17312)

Top 3 Functional Annotations

Value Algorithm Source
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 349.0
  • Bit_score: 502
  • Evalue 3.90e-139
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G2_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 352.0
  • Bit_score: 415
  • Evalue 4.40e-113
tRNA-specific 2-thiouridylase mnmA similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 350.0
  • Bit_score: 441
  • Evalue 2.80e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1053
ATGAGAGTGCTGGTCGCGATGTCCGGCGGCGTGGATAGCTCCGTCGCCGCGGCGCTGCTCGTCGAGCAGGGTCACGACGTGATCGGCGCGACGATGAAGCTGTTCTGTTACGGCGACAGCGTCCCCGATCGTCCGTGCTGCTCGCTCGATTCGATCACCGACGCGAAGCTCGTCGCGCACAAGCTCGGCATCCCGCACTACGTCCTGAATCTCGAGGACCGGTTCGGGCACGACGTGATCGACAACTTCGTCGCCGAGTACGCTCGGGGGCGCACGCCGATTCCGTGCGTCCGCTGCAATTCGTTCACCAAGTTCCGCGATTTTCTCTATCACGCCGACGCCCTCGACTGTGACGCGATCGCCACGGGCCACTATGCGATTGCGCACGACGGCGCGGTGTTCCGCGGGCTCGACCGGCAGAAGGACCAGTCCTACTTCTTGTGGGGCATCGATCGCGGTGTCGTCACCCGCATGCTCACGCCCGTCGGTGAGTTGACGAAGCTGCAAACCCGGGTCGTTGCCCGGCGTTTGGGATTAGTGACCGCAGACAAGAAAGAATCGGTCGAGATCTGTTTCGTGCCCGACGACGATTACGTGTCGGTCCTTGAGCAGCATCTTCCCGCCGATGCACCGGCCCTCTCGCCGGGCGCATTCGTCACGACGAGTGGCGATGTCGTCGGTGAGCACGGTGGTTTCGCGCGCTACACGGTCGGCCAGCGGAAGGGGCTGCCCGGCGGGTTCGACGAGCCGATGTACGTCGTCGCGATCCGTCCTGCGACGCGCGAAGTCGTCGTGGGCCGCGGCGCGGAGTTGTTCGGACACGCCGTGTCCCTGGAGGAGGTCAACTGGCTCGTCGAACCACTCGGTCCCGGCGATCCGGTATGGGTGCAATGCCGCTACCGCGCGCGCGCGGTGCCCGGCACGATTGCTGCGAAAGCCGACGGCCGCATCGCGCTCCGGCTCGCCGAGCCGGTTCGGGCGATCGCGCCGGGGCAGTCCGGCGTCCTGTATGACGCGGACGAGCGGCTGCTCGGTGGTGGCGTGATCGTCTAA
PROTEIN sequence
Length: 351
MRVLVAMSGGVDSSVAAALLVEQGHDVIGATMKLFCYGDSVPDRPCCSLDSITDAKLVAHKLGIPHYVLNLEDRFGHDVIDNFVAEYARGRTPIPCVRCNSFTKFRDFLYHADALDCDAIATGHYAIAHDGAVFRGLDRQKDQSYFLWGIDRGVVTRMLTPVGELTKLQTRVVARRLGLVTADKKESVEICFVPDDDYVSVLEQHLPADAPALSPGAFVTTSGDVVGEHGGFARYTVGQRKGLPGGFDEPMYVVAIRPATREVVVGRGAELFGHAVSLEEVNWLVEPLGPGDPVWVQCRYRARAVPGTIAAKADGRIALRLAEPVRAIAPGQSGVLYDADERLLGGGVIV*