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13_1_40cm_3_scaffold_3944_14

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: 12503..14101

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 526.0
  • Bit_score: 849
  • Evalue 2.40e-243
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 527.0
  • Bit_score: 868
  • Evalue 4.10e-249
RNA binding S1 domain protein similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 531.0
  • Bit_score: 849
  • Evalue 6.70e-244

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1599
ATGACTCTGCTGTATGAGGGGACGCTCTCGAATATCGAAGAAGGCGAGATCGTCAAATCGAAGGTGCTGCGCGTGACCGACACCGCCGTCATCCTCGACGTCGGCTTCAAGTCCGAAGGCGCGGTCCCCATCGATGAGTTCAAAGATCCGAAGAGTCTGAAAGAAGGCGACGAGGTCGAAGTCTTCCTGGAGCACCTCGAGGACCAGGAAGGCGCCGTCGTCCTGTCGAAGAAGAAGGCTGACTTCATGCGCGTCTGGGAGAAGATCCGGGAGGCGCACGAAAAAGATGAAGCGGTCACCGGGACGCTGGTGAAGAAGATCAAGGGCGGTGTGGTCGTGGACCTCATGGGCGTGGATGCGTTCCTGCCCGGCAGCCAGATCGCGCTGCGTCGCGTGCCGAACATCGACGAGCTGCTCGGCCAAAGCTTCGAGTTCAAGATCATCAAGCTCAACAAACGGCGTCGCAACATCGTCGTGTCGCGCCGGGTGTTGCTCGAGGCCGAGCGCAAGACGAAACGCGACGTCCTGATGAAGGAGTTGTCGGTCAATCAGGTGCGGAAGGGCGTCGTCAAGAACATCACCGACTTCGGGGCGTTCATCGATCTCGGCGGCGTCGACGGCCTGCTGCACATCACCGACATGAGCTACGGGCGCGTGTCGCATCCGTCCGAGATGGTGCAGATCGGTCAGGAGCTCGAGGTCAAGGTGCTCGACATCGATTGGGAGCGCGAGCGCATTTCGCTCGGACTCAAACAGCTGCAGCCGTACCCGTGGCAGAACGTCGCTGCGAAATATCCGGTGGGCACGCGCGTGCAGGGCAAGGTTGTGTCCATCACCAACTACGGGGCGTTCGTCGAGCTCGAGCCGGGCATCGAGGGGCTCGTGCACATTTCCGAGATGAGCTGGACCCGCAACGTCCGCCATCCCTCCAAGCTCGTGTCGATCGGTGAATCGATCGAGGCGGTGGTCCTCAAGGTCGACGAGACGGAAGAAAAAGTCTCGCTCGGCATGAAGCAGACGGAGCAGGACCCGTGGATGGCGCTGCCGCAGAAGTATCCGGTCGGCACGCGGCTCCGCGGCAAGGTGCGCAACCTCACGTCGTTCGGCGCATTCGTGGAAATCGAGCCGGGGATCGACGGCCTGATTCACATCTCCGATATGTCGTGGACCAAGCGCGTGCAGCATCCGTCCGAGGTCGTGAAGAAGGGCGACGAAGTCGACGTCCTGATTCTGAACGTCGACGCCGAGAACAAACGGATCTCGCTGGGGCTGAAGCAGGCGCAGGAAGATCCGTGGCTCCGTATCGGGGAGACGTACCCCGTCGGCACGGAGCTGCGCGGGCGCGTCATGCGCCTCATGGACAAGGGGGTCGTCGTCGACCTCGGCAGCGATATCGAGGGCTTCGTGCCGATGTCGCAGCTGGGCATTCCGGATATTCAGCAGCCCGGCGATGCGGTGAAAGAAGGGCAGGCGGTGGAGCTGAAGGTTTTGGAGGTTGATCCGATCCATCATCGCATTGTATTGGCAGCCACCGGATTCCCGAAGGACGACGTGGTGCCGGTGCCAGCCAGTAACGAGACGCCTAGGTTAGACGCCTAG
PROTEIN sequence
Length: 533
MTLLYEGTLSNIEEGEIVKSKVLRVTDTAVILDVGFKSEGAVPIDEFKDPKSLKEGDEVEVFLEHLEDQEGAVVLSKKKADFMRVWEKIREAHEKDEAVTGTLVKKIKGGVVVDLMGVDAFLPGSQIALRRVPNIDELLGQSFEFKIIKLNKRRRNIVVSRRVLLEAERKTKRDVLMKELSVNQVRKGVVKNITDFGAFIDLGGVDGLLHITDMSYGRVSHPSEMVQIGQELEVKVLDIDWERERISLGLKQLQPYPWQNVAAKYPVGTRVQGKVVSITNYGAFVELEPGIEGLVHISEMSWTRNVRHPSKLVSIGESIEAVVLKVDETEEKVSLGMKQTEQDPWMALPQKYPVGTRLRGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDEVDVLILNVDAENKRISLGLKQAQEDPWLRIGETYPVGTELRGRVMRLMDKGVVVDLGSDIEGFVPMSQLGIPDIQQPGDAVKEGQAVELKVLEVDPIHHRIVLAATGFPKDDVVPVPASNETPRLDA*