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13_1_40cm_3_scaffold_4160_5

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: 3633..4190

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 182.0
  • Bit_score: 265
  • Evalue 3.90e-68
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 185.0
  • Bit_score: 273
  • Evalue 2.00e-70
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 185.0
  • Bit_score: 265
  • Evalue 8.50e-69

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 558
GTGGCGTGGGCAAAACAGGGCCACGACGCGGCGTTCCGCGAGCTCGTGCGGCGCTACGAGCGGCCCGTGTTTTCCTTGCTGTATCGCATGGTCCGCGATCGCGCCCTCGCCGAAGACCTGGCGCAGGAAACGTTCATCAAGGTCCTGAACGGCATCAAGTCCTACCGGCCCGAGTTCAAGTTCTCGTCGTGGATTTTCAAGATTGCCAACAACGCCGCGATCGATCACTTGCGCCGCAAGAGCATCGACACGCTGTCGCTGGACGGCGCGCCCGGCGCCGAGACACCCGACCAGATGCGCGCGACGCAGCTGCAGGTCGGCGACCGCGCCGAAAGCCCGTTGGATGAAGTCGAGAACCGGGAGCTGGGTACCGCGATCGAACGGGCCATTGCCCGGCTGCGGCCGGAGTACAGGTCGTGCATCTTGTTACGGCACGTCGAGGGCTATTCCTACGAGGAAATCGCGACCACACTGGAGCTGCCGCTGGGCACGGTCAAGACCTATATCCATCGGGCCCGTAATGAATTGCGCGGCTACCTGGAAGGGCGCCGTGAGTGA
PROTEIN sequence
Length: 186
VAWAKQGHDAAFRELVRRYERPVFSLLYRMVRDRALAEDLAQETFIKVLNGIKSYRPEFKFSSWIFKIANNAAIDHLRRKSIDTLSLDGAPGAETPDQMRATQLQVGDRAESPLDEVENRELGTAIERAIARLRPEYRSCILLRHVEGYSYEEIATTLELPLGTVKTYIHRARNELRGYLEGRRE*