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13_1_40cm_3_scaffold_605_7

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: 3007..4239

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 409.0
  • Bit_score: 541
  • Evalue 6.30e-151
putative RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 409.0
  • Bit_score: 544
  • Evalue 1.00e-151
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 409.0
  • Bit_score: 541
  • Evalue 1.80e-151

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGGGGCTCGGTCGAAGTGCGCCCGGTGTGGGACAAGACCTCATAGACACGATCGAGTCGGTCTACCGCGCCGAGTCGCGCCGCGTGCTTGCCACCCTGATCCGTCTCCTCGGTGATTTCGATCTCGCCGAGGAGGCACTCCAGGAGGCGTTCGCGGCGGCCGTCGAGAAGTGGCCGGCCGAGGGCATTCCGTCCAACCCTCGAGCGTGGCTCGTGTCGACCGGTCGGTTCAAGGCAATCGATCGTCTGCGTCGCAGCCAGCGCGAAGTCTCCGAGGAACACGGCGTGCCGCAAGCAGCCGCGGAGTACAAAGAAGTCGCCGACGACGAGCTGCGGCTGATCTTCACCTGCTGTCACCCTGCCCTGTCACCCGATGCGCAGGTGGCGCTGACGCTGCGCGAAGTCTGCGGCCTCACGACCGAGGAGATCGCGCGCGCATTTCTGACGACGGCCCCGACCGTGGCCCAGCGGATCGTCCGCGCCAAAGGAAAGATCAAAGGCGCCGGCATTCCGTACGAAGTTCCCGCCCTCTCCGATCTCCCGGAACGGCTCGATGCCGTGCTGCGCGTCGTCTACCTCGTGTTCAATGAGGGTTACCGCTTCCGGCACGATCTCTCGGGCGAAGCGATTCGTCTGGGACGTCTGTTGGCCGAGCTGCTGCCTGATCCCGAGGTACTCGGACTGCTGGCGTTGATGCTGCTCCACGATTCACGTCGAGCTGCCCGGCTTTCGGTTGAAGGCGACATCGTGCTGCTCGAGGAGCAGGATCGCTCGCTGTGGGATCGCGACGAGATCGCTGAAGGCGTGGCGCTGGTCGAGCGCGCGCTCGCGAGCCGCAGAGTCGGGCCGTATCTGCTCCAGGCGGCGATCGCCGCCGTGCATGCTGATGCGACTAGTCCCGCGAAAACGGACTGGTACGAGATCGTCGGGCTCTACGACGTGCTCTTACGGATGGATCCGTCGCCGGTCGTCGAGCTGAATCGCGCGGCCGCGATCGCGATGCGCGACGGTCCGGCCGCCGGCTTGGCACTGATCGACGCCATTCTCGCGCGGGGTGATCTCACCGACTACAACCACGCGCATTCGGCGCGAGGGGAATTGTTGCGGCGGCTCAAGCGGCTGGGCGAGGCGAGCGCGGCCTACAAGCGAGCGCTCCAGCTCGTCACTCAAGACGCTGAACGGCGGTTCCTCGAAAGACGACTCGAGAGCTTACAACAGCCACTCGATCGGTAG
PROTEIN sequence
Length: 411
MGLGRSAPGVGQDLIDTIESVYRAESRRVLATLIRLLGDFDLAEEALQEAFAAAVEKWPAEGIPSNPRAWLVSTGRFKAIDRLRRSQREVSEEHGVPQAAAEYKEVADDELRLIFTCCHPALSPDAQVALTLREVCGLTTEEIARAFLTTAPTVAQRIVRAKGKIKGAGIPYEVPALSDLPERLDAVLRVVYLVFNEGYRFRHDLSGEAIRLGRLLAELLPDPEVLGLLALMLLHDSRRAARLSVEGDIVLLEEQDRSLWDRDEIAEGVALVERALASRRVGPYLLQAAIAAVHADATSPAKTDWYEIVGLYDVLLRMDPSPVVELNRAAAIAMRDGPAAGLALIDAILARGDLTDYNHAHSARGELLRRLKRLGEASAAYKRALQLVTQDAERRFLERRLESLQQPLDR*