ggKbase home page

13_1_40cm_3_scaffold_1723_17

Organism: 13_1_40CM_3_Deltaproteobacteria_69_14

partial RP 19 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 6 / 38
Location: comp(19260..20618)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D TruD n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA39_ANADF similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 459.0
  • Bit_score: 457
  • Evalue 1.70e-125
  • rbh
Putative tRNA pseudouridine synthase D 2 {ECO:0000313|EMBL:GAO03890.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Ana similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 456.0
  • Bit_score: 456
  • Evalue 3.10e-125
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 459.0
  • Bit_score: 455
  • Evalue 1.40e-125

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaeromyxobacter sp. PSR-1 → Anaeromyxobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
GTGAAGATCAAGCAGCGCCCCGAAGACTTCATCGTGCGCGAGGGCTTCCGATTCGAGCCGGAACCGGAAGGACCGGTGTGGGTCTACCGGATGGACAAGCAGAAGGTCTCGACGCTACAGGCGCTGGAGCGCATCTCGAAGGAATTCGCCGTGCGCCGCCGCGACCTCTCTGTCTGCGGGCTGAAGGACAAGCAGGGCCGCACCGAGCAACTCGTCGGCGTGCTGGGCGGTGCGCTCGGCGCGTCCGAGGTCGTGCAGAGCGGCGATCTGCGTCTGAAGCTCATCGGCCGGACCGCGCAACCGCTCACCTCCGCGAACATCTCCGCCAACCGATTCGAGGTGACCGTGCGCGACCTCTCCGCCGAAGAGGCGGAGCGCGTGCCGGAGAGCGTAGCGGAGGTGCAGCGTGCCGGCGTGGTGAACTACTTCGACTCGCAGCGCTTCGGGTTCCTCAAGCACGGACAGGGCTTCCTGGCTCGCCACCTGCTGCGCGGCCATTGGGAAGCCGCGCTCAAGGCCTTCCTCGCCACTCCCAGCGAGCTCGATCGCAGCGACGACGCCAAGGTGAAAGCGTTCTGGCGCGACCACTGGGGCGAGTGGCAGCTGCGCGCCCCACACGATGCCGGCAAGCGCTATGCGCCGGTGCTGCGGCCGCTGCGCGAGGATCCGAAGGATTTCAAAGGAGCCTTCCTGCACATCGACCGCCGCGTGCGGACGCTGGCGCTCTTCGAGCTGCAGAGCTTCATCTGGAACGAGGGCGTCAAGCGCTACCTCGCCGCGCGCGTGCCGGCCTCCGATCTGATCGGCCTGCGCTACCAGGCGGGGTCCTTGCTGTTCCCCCGCGCCCTTCCCCGCGCCCTGCGCGACGAGCTGTGGTCCACGCCGTTTCCGCTGCTCGCGCCGGAGTCGAGCTTCGAGGACGACCTCGTGCGCACATCCGCCCTCGGCGCGCTGCGCGCGCAAGGACTGGAGCTGCGCGATCTGCGAGTTCCCGATACGCCCCAGCTCTTCTTCAAGCATGAGGAGCGTCCGCTGTTCGTGGTCCCCGGCAAGCTCCGGGCGAACGAGCCGCGCGCCGACGAGCTGAACCGCGGGCGGAGGAAGGTGAACCTGTCGTTCACCCTTCCGCCGGGCGCGTACGCTACGCTCGTCGTCCGACGCTTGCTCTGGTTCGCTGCCGACTCCAGGCGGTCGGAGCAGCCCGTGGGCCGCGCATGGGGACGTCCGCTCGAGGAAGCAGCGCGGGTCCCCGCCCCGACCCGCCCCAACGCGCCGCGACAGGAGAAGATGGGCTTCCGCGAGCGGCAGCGGAAGAGGAAGGAAGCGCGGGCCGCGAACCGCGCGGCAGCGAAGAAGTAG
PROTEIN sequence
Length: 453
VKIKQRPEDFIVREGFRFEPEPEGPVWVYRMDKQKVSTLQALERISKEFAVRRRDLSVCGLKDKQGRTEQLVGVLGGALGASEVVQSGDLRLKLIGRTAQPLTSANISANRFEVTVRDLSAEEAERVPESVAEVQRAGVVNYFDSQRFGFLKHGQGFLARHLLRGHWEAALKAFLATPSELDRSDDAKVKAFWRDHWGEWQLRAPHDAGKRYAPVLRPLREDPKDFKGAFLHIDRRVRTLALFELQSFIWNEGVKRYLAARVPASDLIGLRYQAGSLLFPRALPRALRDELWSTPFPLLAPESSFEDDLVRTSALGALRAQGLELRDLRVPDTPQLFFKHEERPLFVVPGKLRANEPRADELNRGRRKVNLSFTLPPGAYATLVVRRLLWFAADSRRSEQPVGRAWGRPLEEAARVPAPTRPNAPRQEKMGFRERQRKRKEARAANRAAAKK*