ggKbase home page

13_1_40cm_3_scaffold_1826_27

Organism: 13_1_40CM_3_Deltaproteobacteria_69_14

partial RP 19 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 6 / 38
Location: comp(27819..28556)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EEB2CE similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 247.0
  • Bit_score: 208
  • Evalue 9.90e-51
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:GAN45021.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 250.0
  • Bit_score: 211
  • Evalue 1.20e-51
family 2 glycosyl transferase similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 249.0
  • Bit_score: 205
  • Evalue 1.40e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
GTGACGCGGCTGTCGGCGACCATCATCGCGCAAGACGAGGAGCGCGATCTGCCGGACTGCATCGCGTCGTTGCAGGGCTTCTGCGACGAGATCCTGATGGTGGATGGCGGCTCGCGCGACCGCACGCGGGAGATCGCCGCCTCGCTCGGCGCACGCGTGCTGGAGCGGCCCTTCGACGATTTCGCGCGCCAGCACGAGTTCGCAAGGGTGGAAGCGCGCGGCGAATGGGTGCTCTCCATCGACGCCGACGAGCGGGCCTCGCCCGAGCTGCGCCGCGCGGTTTTCGGCGGAGCCGCGGCCTACTCGCTGCCGTTCAGGAACCACTTCCGTGGCATCTGGCTTCGCCATGGAGGCTTCTGGCCCGATCGCCACGTGCGTCTGTTCCGGCGGGAAGGCTGCCGCTACGACCCCGCCCGCACCGTCCACGAGAGGCTGATCGTGGACGGTCCGATCGGCAGCCTCGACGCGCCGATCCTGCACTACACGTTCGAGTCGCTCCAGGACTGCCTGGTGAAGATGGAGCGGTACGGCGAGCAGTCGGCGCGGATGCTGCATGCGCGAGGGGTTCGCGCCACGGCCTGGGACGTAGCGGCGCGGCCGCTGTGGCGCTTCGTGCGCGGATACGTGCTGCGCCTCGGCTTCCTCGACGGCGCGGCGGGCGCGGCGATGGCTTGGGCACGGGCGTACGAGGCGTTCCGGCGTTACTCCCGCCTCTGGGAGCTGTCGCATTTTTCGTGA
PROTEIN sequence
Length: 246
VTRLSATIIAQDEERDLPDCIASLQGFCDEILMVDGGSRDRTREIAASLGARVLERPFDDFARQHEFARVEARGEWVLSIDADERASPELRRAVFGGAAAYSLPFRNHFRGIWLRHGGFWPDRHVRLFRREGCRYDPARTVHERLIVDGPIGSLDAPILHYTFESLQDCLVKMERYGEQSARMLHARGVRATAWDVAARPLWRFVRGYVLRLGFLDGAAGAAMAWARAYEAFRRYSRLWELSHFS*