ggKbase home page

13_1_40cm_3_scaffold_1834_4

Organism: 13_1_40CM_3_Deltaproteobacteria_69_14

partial RP 19 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 6 / 38
Location: comp(3751..4854)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000255|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000255|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000255|HAMAP-Rule:MF_01082}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 356.0
  • Bit_score: 334
  • Evalue 2.50e-88
tRNA pseudouridine synthase D n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=TRUD_ANADF similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 356.0
  • Bit_score: 334
  • Evalue 1.80e-88
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 356.0
  • Bit_score: 334
  • Evalue 5.00e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Anaeromyxobacter sp. Fw109-5 → Anaeromyxobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
GTGGCAGCGGAACAGGGGCGGCTGGGACAAGGACTGAGATTGACCGACCTGCTCGCGCAGCGGTCCGTTCCCCTGCTGACGCCGGAGCTACCGGGCACGTCGGGGCTGGTCCGCGTCGCGGAGGACGACTTCTACGTCGAGGAGCTGCCGCTGTACGAGCCGTCCGGGGCCGGGGAGCACCTCTACCTGACGGTGGAGAAACGGGGTCGCTCCACCGTGGAAGTGGCGGAGGAGATCGCGCGGAACCTGGGAGCGCGCGAACGCGACGTGGGCACCGCGGGCCTCAAGGACAAGCGCGCCGTCAGCGTGCAGCGCATCAGCGTCCTCTCCAAGGCAACCCCGGAGGAGGCGCTGCGCCTGCAGGGGCGTGGATTCCGCGTGCTGGCCGCAGGCCGGCACGGCAACAAGCTCCGCCCGGGGCACCTGCGCGGGAACCGCTTCCGCATCGTCGTCCGCGGCGTCGTCCCGGAGGCGATCGCGCGCGCCCGCACCGTCTGTGCGCGCCTGGCGGAAACCGGCGTCGCCAACCTGTTCGGTCCCCAGCGGTTCGGAAAGCACGGCGACAACGCCGAGCTCGGCCGCGCGATCCTGCTGCGCGAGCGCCAGGTGCGCGACCGCTTCCTGCGGCGCATCGCGCTCTCTGCGCTGCAGTCGGAGCTGTTCAACCGGTGCCTGGCGGCGCGGATCGCCGATGGCCTGTTCGCGACCGCGATCGACGGCGACGTCTTGAAGAAGCGCGCCACCGGCGGGCTGTTCGTGTGCGACGATCCGCGCGCCGATGCTCCGCGCGTCCTCGCGGGCGAGCTGGATCCGGCGGGACCTCTGCCCGGACATTCGCTCTTCGCATCCCGCGGCGAGGCGGCCCGCCGCGAGCAGGCGGTGCTGGTCGCGTCCCACATCGACCCCGAGTCGTTCGCCTCCGCGGGCGACGAGATGCAAGGGGCGCGCAGGCCCTACCGCATCGCGCCAAGCGAGCTCCGGGTGGAGCCGGCAGGCGACGACGCGCTGGTCGTCTCGTTCGCCTTGCCCAAGGGAAGTTATGCCGTTTCCGTCCTCCGGGAGATCAGCAAAAACGACGCCGAAGAGGCCGATTCGAGCGCGTGA
PROTEIN sequence
Length: 368
VAAEQGRLGQGLRLTDLLAQRSVPLLTPELPGTSGLVRVAEDDFYVEELPLYEPSGAGEHLYLTVEKRGRSTVEVAEEIARNLGARERDVGTAGLKDKRAVSVQRISVLSKATPEEALRLQGRGFRVLAAGRHGNKLRPGHLRGNRFRIVVRGVVPEAIARARTVCARLAETGVANLFGPQRFGKHGDNAELGRAILLRERQVRDRFLRRIALSALQSELFNRCLAARIADGLFATAIDGDVLKKRATGGLFVCDDPRADAPRVLAGELDPAGPLPGHSLFASRGEAARREQAVLVASHIDPESFASAGDEMQGARRPYRIAPSELRVEPAGDDALVVSFALPKGSYAVSVLREISKNDAEEADSSA*