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13_1_40cm_3_scaffold_6219_5

Organism: 13_1_40CM_3_Deltaproteobacteria_69_14

partial RP 19 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 6 / 38
Location: comp(4069..7152)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LD19_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 578.0
  • Bit_score: 663
  • Evalue 4.70e-187
  • rbh
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EJL90065.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxal similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 578.0
  • Bit_score: 663
  • Evalue 6.60e-187
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 554.0
  • Bit_score: 651
  • Evalue 4.00e-184

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3084
ATGCGCTTTCGTATCACCACTCTTGATGGTGGCCAGGGAGTCGCGATCCACGAGATGGACGCACTCGACGAGGCCGACGCGCACCGCCAGGCGCTCGCGCGCGGCCTGCGCGTGCTCGCGATCCAGGCGGCGCGCCTGAAGGGCTGGCGGCGCGCGCGCCTGTCACTGGTAGCGTTCAGCAACGAGCTCGTCGCGCTGCTCGAGGCCGGCCTGTCGCTCGTCGAGGCGATCGACGCCTTGACCGAGAAAGAGCGCGACGAGTCGGTCCGCCACCTGCTCGGTGAGTTCCCGAGCAGTTTCCCGACGCTGTACGTCGCGACCGTGCGCGCGAGCGAGCGCACCGGCGCGATCGCCGAGGCGCTCAGGCGCTTCGTCGCCTACCAGCAGCAGATAGATCTATTGAAGAAGCGGCTGATCAACGCGTCGATCTACCCGGCCGTGCTGCTCGCGGCCGGCTCGCTGGTCGTGCTGTTCCTGGTCGCCTACGTCGTGCCGCGGTTCTCGGGTATCTACGAGGACATCGGCGGCGAGCTGCCGCTCGCCTCGAAGATGCTGATGCAGTGGGGGCGGCTGCTCGACGCGCACGGCCTCGCGGTGCTGGCCGGCTTTCTCGCCTGCGTCGCGCTCGCCGGCTACGGCGTGCTGCGGCCCGGCTTTCGTGCCGCGGTCGGGCGCCTGTCCGCGCGCATCCCGATGGTCGGCCACCAGATCGAGCTCTACCAGCTCGCGCGCCTGTACCGCACGGTCGGCATGCTGCTGCGCGGCGGCCTGCCGGTCGTGACCGCGTTCGAGATGACGCGCGGCCTGCTGGCTGCGGCAGCACGGCCGCAGCTCGCGGCCGCCACGCGCGCGGTGAGCGAGGGACGCTCGCTGACCGACGCGCTCGCCGCCCAGGGCCTGACCACGCCGGTCGCCGAGCGCATGCTGCGGGTCGGCGAACGCAGCGGCAACATGGGCGAGATGATGGAGCGGATCGCGGCGTTCTACGACGAGGAGCTGTCGCGCTTCGTCGACGTCGCCACGCATCGTCGTGCTCATGTACTTCCCGATCTTCGAGCTTGCCGGGAGCATCCGATGAGCGCGGCGCGCGAGCCCAAGGCGGCCAACACCCTGATCGATCTCAGCAGGGTCCGCGAAGAGCTCGATCGGCTCACTGAACGTTCCGAAGCGCCTGCCGAGCTCGCGGCTCATCCCCCCGATTCCCGGGCTGGCTGGCAGCCGCAAAGGGGCACGGTCCTGGACGCGCTGGACGCCGTGGAGGCTATCGACCCCCTGGACGCCGTGGAGATTGTGGACGCCCTGGACGCTGTGGAGGTTGTGGACGCCCTGGACGCCGTGGAGATTGTGGACGCGCTGGACGCCGTGGAGATTGTGGACGCCCTGGACGCCGTGCAGCCGCAGCCGGCCCCGCCGCCGGTGCCGCCGTCGTTGGCGGAGGATGCGCTGCGCGCGGCGGTCGCGAGCGCCGCTGCGACCGGCCGCTCGCCGGTCGCGGTACTCGCCGAGACCAGCGGCCTGGACGGCGACGCGCTGGCCCGCGCGCTCGGCGCTGCTCTCCGCTATCCCGTGCTCGAGAGCGCGGCGCTGATGGCGCTCGCGCCCGCCTTCGACCTGCTCGGGCCCACCGACGCGGCCCAGCGCGGCTGCGTGGTCGTCAAGCGCGGCGCCGAGTACCTCGCTGTCATCGGCAACCCGTTCGATCTGGCGCTGCGCGGCTGGCTCGAGCTCAAGATCCCGCAGAACCTGTCCTGGCACCTCGCCGCGCCGGACGAGATCAAGGCCTACGTCGCGAAGTTCGAGCAGGACCTGCGCGCGATGGACGTCGCGGCGGTGGCCAGCGACGGCGAGAAGCTCGTCGATACCGACATCGAGAATCTGTCGCTCGCCTCGATCAGCGCCGACTCGAGCCCGGTCGTCAAGCTCGTGCACTCGACCGTCTACGACGCCCTCAAGGCGGGCGCCAGCGACATCCACCTCGAGACGCGCCCGGGCGGCCTCGCGGTCCGCTACCGCCTCGACGGCGTGCTCGTGCACATCGTCACGCTCGGCGGCACGGATCTCTGCGAGCAGGTGATCTCGCGCGTCAAGGTCATGAGCGAGCTCGACATCGCCGAGCGGCGCGTGCCGCAGGACGGCCGCTTCAGGCTGGGGCTCAAGGGCCGGCCGATCGACTTCCGCGTCTCGGTGATGCCGAGCGTGCACGGTGAGGACGCGGTGCTGCGCATCCTCGACAAGCAGGCGCTGACCGACGAACTGCAGGGCCTGCGGCTCGATGCGCTCGGCTTCGAGGCGGACGTGGTCAAGCGCCTGCGGCGCCTGTCGGAGCTGCCCTACGGCATGCTGCTCGTGACCGGCCCGACCGGCAGCGGCAAGACGACGACGCTCTATGCCGCGATCTCCGAGACCAACACCGGCCGCGACAAGATCGTCACCATCGAGGATCCGGTCGAGTACCAGCTGCCCGGCGTGCTGCAGATCCCGGTCAACGAGAAGAAGGGCCTGACCTTCGCGCGCGGCCTCCGGTCGATCTTGCGCCACGACCCGGACAAGATCATGGTCGGCGAGATCCGCGATCCGGAGACCGCGCAGATCGCGATCCAGTCGGCGCTGACCGGCCACCTCGTGTTCACGACCGTTCACGCCAACAACGTCTTCGACGTGCTCGGCCGCTTCTCGCACATGCAGGTCGACGCCTACGCCTTGGTCTCGGCCCTGAACGGCATCCTCGCCCAACGCCTCGTGCGCATCGTCTGCGAGCAATGCGCAGAGCCGGTACAGCCGTCGCACGAAGTCATCAGCCAGTCGGGCCTGCTGCTGCCGGCGGTCTCGGACTGGAGGTTCCGCACCGGCCGCGGCTGCGCCCAGTGCCGCGGCACCGGCTACAAGGGCCGCCGCGCGATCGGTGAGCTGCTCGTCCTGAACGACGAGTTGCGCGAGGCGATCGTGGCGCGCGCGCCGGCACGCCGCCTCAAGGAGCTCGCCCTGGCGGGCGGCTCGAAACTCCTCCGCAGCGCCGCACTCGAGCTGGTGCAGCACGGCGTTACCACCCTTCTGGAGGCCAACCGTGTCACCGCTCTGGCGTGA
PROTEIN sequence
Length: 1028
MRFRITTLDGGQGVAIHEMDALDEADAHRQALARGLRVLAIQAARLKGWRRARLSLVAFSNELVALLEAGLSLVEAIDALTEKERDESVRHLLGEFPSSFPTLYVATVRASERTGAIAEALRRFVAYQQQIDLLKKRLINASIYPAVLLAAGSLVVLFLVAYVVPRFSGIYEDIGGELPLASKMLMQWGRLLDAHGLAVLAGFLACVALAGYGVLRPGFRAAVGRLSARIPMVGHQIELYQLARLYRTVGMLLRGGLPVVTAFEMTRGLLAAAARPQLAAATRAVSEGRSLTDALAAQGLTTPVAERMLRVGERSGNMGEMMERIAAFYDEELSRFVDVATHRRAHVLPDLRACREHPMSAAREPKAANTLIDLSRVREELDRLTERSEAPAELAAHPPDSRAGWQPQRGTVLDALDAVEAIDPLDAVEIVDALDAVEVVDALDAVEIVDALDAVEIVDALDAVQPQPAPPPVPPSLAEDALRAAVASAAATGRSPVAVLAETSGLDGDALARALGAALRYPVLESAALMALAPAFDLLGPTDAAQRGCVVVKRGAEYLAVIGNPFDLALRGWLELKIPQNLSWHLAAPDEIKAYVAKFEQDLRAMDVAAVASDGEKLVDTDIENLSLASISADSSPVVKLVHSTVYDALKAGASDIHLETRPGGLAVRYRLDGVLVHIVTLGGTDLCEQVISRVKVMSELDIAERRVPQDGRFRLGLKGRPIDFRVSVMPSVHGEDAVLRILDKQALTDELQGLRLDALGFEADVVKRLRRLSELPYGMLLVTGPTGSGKTTTLYAAISETNTGRDKIVTIEDPVEYQLPGVLQIPVNEKKGLTFARGLRSILRHDPDKIMVGEIRDPETAQIAIQSALTGHLVFTTVHANNVFDVLGRFSHMQVDAYALVSALNGILAQRLVRIVCEQCAEPVQPSHEVISQSGLLLPAVSDWRFRTGRGCAQCRGTGYKGRRAIGELLVLNDELREAIVARAPARRLKELALAGGSKLLRSAALELVQHGVTTLLEANRVTALA*