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13_1_40cm_3_scaffold_8123_11

Organism: 13_1_40CM_3_Deltaproteobacteria_69_14

partial RP 19 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 6 / 38
Location: 11782..12384

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 dependent DNA-binding response regulator Tax=RBG_16_Anaeromyxobacter_69_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 201.0
  • Bit_score: 277
  • Evalue 1.50e-71
Sigma-54-dependent transcriptional response regulator id=4959207 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 197.0
  • Bit_score: 210
  • Evalue 2.10e-51
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 197.0
  • Bit_score: 203
  • Evalue 7.30e-50

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Taxonomy

RBG_16_Anaeromyxobacter_69_14_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGCTGAAGGACATCGCCGTCGCGGTGGAGGCGATGCATACGGGCGCCCTCGATTACGTCACCAAGGACTTCTCCCCGCCCGAGCTGATCGCGCGCGTGCGCAAGACGCTGGCGGAGCTCAGGGCGGGGCGCGAGCTCGAGCGGTTGCACGACGTCGAGGCGACGCACGTGGGCCGCCCGATGGTCCTGGGCAGCTCTTCGCGGATGCGTGCGGTGGTCCAGGTGGCGGAGAAGATCGCTCCCAAGCCCGTCACCGTGCTGATCACCGGAGAAAGCGGCACGGGCAAGGAAGTCCTGGCGCGGTACATCCATGCCCGCAGCGATCGCAAGACGGGGCCCTTCGTGGCGGTCAATCTTCCGGCGATTCCCGCGAACCTGGTGGAGAGCGAGCTGTTCGGCCACGAGCGCGGCGCGTTCACCGGCGCCGACCGGCAGAAGCTCGGCAAGTTCGAGCTGGCGAACGGGGGGACGCTGTTCCTCGACGAGATCGGCGACCTCGCGCTCGACCTGCAGGCGAAGATCCTCCGGGCGCTGCAGGAGCACGAGATCGAGCGCGTCGGCGGCGAGAAGCCCATCCTGCTCGATCTGCGCGTGATCTGCGCG
PROTEIN sequence
Length: 201
VLKDIAVAVEAMHTGALDYVTKDFSPPELIARVRKTLAELRAGRELERLHDVEATHVGRPMVLGSSSRMRAVVQVAEKIAPKPVTVLITGESGTGKEVLARYIHARSDRKTGPFVAVNLPAIPANLVESELFGHERGAFTGADRQKLGKFELANGGTLFLDEIGDLALDLQAKILRALQEHEIERVGGEKPILLDLRVICA