ggKbase home page

13_1_40cm_3_scaffold_4053_11

Organism: 13_1_40CM_3_Acidobacteria_56_11

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 12 / 38
Location: 8415..8684

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYK1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 81.0
  • Bit_score: 100
  • Evalue 8.10e-19
Iojap-related protein; K09710 ribosome-associated protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 89.0
  • Bit_score: 113
  • Evalue 1.70e-22
iojap family protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 90.0
  • Bit_score: 98
  • Evalue 1.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_61_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGACAAAGAAACTCAACTATCTGAAGCCATCGAAGCAGCACTCGACAAGAAAGCTCAGGATGCGGTGGTGCTGGAGCTTGTCGAGATTTGCTCCTTCACCGATTACTTTCTCATTTGTACCGGAACCTCAACGCGTCACAATCAAACCATTGCAGACCACATCGAAGAAACCCTTAAGAAAGAAGGTGTGCGGCCGTTGCACATCGAAGGGTACCCTGAAGGCGATTGGATCCTTCTGGATTACGTCGACTTCGTCGTGCACATCTTC
PROTEIN sequence
Length: 90
MDKETQLSEAIEAALDKKAQDAVVLELVEICSFTDYFLICTGTSTRHNQTIADHIEETLKKEGVRPLHIEGYPEGDWILLDYVDFVVHIF