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13_1_40cm_3_scaffold_4010_9

Organism: 13_1_40CM_3_Acidobacteria_56_11

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 12 / 38
Location: 6198..8399

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=35554 species="Bacteria; Proteobacteria; Delta similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 694.0
  • Bit_score: 587
  • Evalue 1.90e-164
Ribonuclease R n=2 Tax=Geobacter sulfurreducens RepID=D7AIS0_GEOSK similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 694.0
  • Bit_score: 584
  • Evalue 1.20e-163
rnr; exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 694.0
  • Bit_score: 584
  • Evalue 3.30e-164

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Taxonomy

Geobacter sulfurreducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2202
ATGGGCGGGAAGAAGGCTCGTAAGCGTGGCGCCGGGCGAAACAGCAAAACGCACGTCGATAAAGAGGATCTGCTGCGATATGTCCGGAAGTCGGCCGATCGCGGGACAAATTTCCGGCACATTCTGGAGGATTTCAATGTCGCGCCGGCGGCGCGCAAGCAAATCAGAGACATCCTGAACCAGTTGGTTAAAGAGGGCAAACTGGCGAAGCATCGTGGTAGCCGGTATGAGGCCGCAGTCCGCAATCTGGTCGAAGGAACGATTCTCGTCCATCGCGATGGATATGGATTTGTCATTCCGAAGGAGAAAATTCAAGGCATCGAGAGCGACATTTATATACCGGCCGCTTTGATCGGACCCGCAATGAATGGAGACAGCGTCAAAGTCGAAATCACGCTGCACAAGCCCGGCGGCAGAGCCGAAGGCCGCGTCGCGAGCGTCGAAAAGAGAGCGCGAAACACCATCGTCGGCCAGCTGCGATATGACGGACAGGTTTTCTTCGTCGCGCCGGCCGATGACAAATTGCCGGAAAAGATCCTGATCACGAATGATGCCGGCGAGCACAAGGACAAGATCGTCGAAGTGGAAATCACGCGCTTTGCCGGCCAGACACGGTGGCCGGCAGGTAAGGTCGTTGCCGTTATTGGATTCATGGATGACCCGGATATCGAAACCAATGTGATTATCAGAAAATTCGGTTTACCGGCCGGGTTTTCGAAAGAAATCGAAGAAGAAGCGGCCGCCCTGCCGGACGCGCTTACGGAAAGGGACCTCACCGGCCGCGATGATTTCCGAAGACGCAACACCATCACGATCGATCCGAAAACGGCGCGCGATTTCGATGATGCGATCGATGTTGAAGTCCTGCCGGATGGGACTTTTCAATTGGGCGTCCACATCGCGGATGTTTCGCACTTCGTCCCTGCCGATTCGGCGATGGACAGGGAAGCCCGGTACCGCGGCACGTCGGTTTACTTTCCCGATCGCGTGATTCCGATGCTTCCCGAAAAGGTTTCCAATCACCTTTGCTCCTTGAACCCGAAAAAGGACCGGCTGGCCCTGAGTGTCGTGATGCACCTTTCGCGTACGGGCGAAGTGCTCGATTACTCCTTTCACAAAAGTGTTATTCATTCGAAGGAGCGCATGACCTATGAGGATGTTCAGCAAATCCTCGATGGCAGCCCGTCGCTCGAGGAACAGTATGCGCATGTTGTACCGCAATTACGCACGCTTCAACGATTGGCCAAAATCATCCAGGAGCGCCGGCGGCAGCGCGGCGCGATCGATTTTGATTTGCCCGAGCCGATGTTGACCTACAACGAAAGGGGCGACGTAGCGGGAATCGTAAAATCGATCCGTCTATTTTCGCACCGCATTGTCGAGGAATTCATGATTCTCGCCAACGAAGTCGTGGCACGGCATCTCGAGGAAAACGAGATTCCGAGCTTGTATCGCGTCCATGAAGAACCCGATCCGATGAAGGTCCAGGAATTCGTCGATATCGTGAGCGGTTTCGGACTCAAGTTCGAACCACGGAAGGCTCAGCCCGCAGACTTTCAGAAATTTATCACCTCGATTGAAGGCCGGCCCGAAGAGCGAATGTTGTCGTACCTGATGCTGCGTTCGTTCAAACAAGCCAGATACTCGGAGGAGAACATCGGTCATTTCGGATTGGCGTCGGACTCCTATACCCATTTCACCTCGCCGATACGCCGGTATCCCGATCTCGTTGTTCATCGGATTCTCAAAGCCGCAATGGCGCGGCGAACTCAACCGTCTGTTCCACATGCCCAACTCGACGCGATCGCCAACGAATCCAGCGAGCGCGAACGACTCGCCGATCAGGCCGAACGTGAGTTGTTCGAGCGGAAGAAAATGCTCCTGATGGAACAGCATCTCGGCGACATGTTCGATGCGATTATCATTGGGATCCGGCGAGACGGCTTCTCCATCGAATTGATCGATCATTTTGTCGAAGGCTTTGTGCCCGTTGCGGAAATCCCAAACGATTCTTATCGACTCGATCCATCTCTCCACGCACTCGTCGGCCGGCATACGCGGCAGCGCTTCCGGCTCGGCGACCGCATTCAGGTTCAGGTCGCGCGGGTGGATAAGCTCCTCGGCCGGGCATACTTTCTCCCTGTTAGTCCGGCTGCGGCGGCCTCCAGGCGTGCCTTGGCCCGTAAAGGAAGTTCACGTTAA
PROTEIN sequence
Length: 734
MGGKKARKRGAGRNSKTHVDKEDLLRYVRKSADRGTNFRHILEDFNVAPAARKQIRDILNQLVKEGKLAKHRGSRYEAAVRNLVEGTILVHRDGYGFVIPKEKIQGIESDIYIPAALIGPAMNGDSVKVEITLHKPGGRAEGRVASVEKRARNTIVGQLRYDGQVFFVAPADDKLPEKILITNDAGEHKDKIVEVEITRFAGQTRWPAGKVVAVIGFMDDPDIETNVIIRKFGLPAGFSKEIEEEAAALPDALTERDLTGRDDFRRRNTITIDPKTARDFDDAIDVEVLPDGTFQLGVHIADVSHFVPADSAMDREARYRGTSVYFPDRVIPMLPEKVSNHLCSLNPKKDRLALSVVMHLSRTGEVLDYSFHKSVIHSKERMTYEDVQQILDGSPSLEEQYAHVVPQLRTLQRLAKIIQERRRQRGAIDFDLPEPMLTYNERGDVAGIVKSIRLFSHRIVEEFMILANEVVARHLEENEIPSLYRVHEEPDPMKVQEFVDIVSGFGLKFEPRKAQPADFQKFITSIEGRPEERMLSYLMLRSFKQARYSEENIGHFGLASDSYTHFTSPIRRYPDLVVHRILKAAMARRTQPSVPHAQLDAIANESSERERLADQAERELFERKKMLLMEQHLGDMFDAIIIGIRRDGFSIELIDHFVEGFVPVAEIPNDSYRLDPSLHALVGRHTRQRFRLGDRIQVQVARVDKLLGRAYFLPVSPAAAASRRALARKGSSR*