ggKbase home page

13_1_40cm_3_scaffold_1639_1

Organism: 13_1_40CM_3_Crenarchaeota_52_10

partial RP 26 / 55 MC: 1 BSCG 8 / 51 ASCG 27 / 38
Location: comp(3..410)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized HTH-type transcriptional regulator PH0140 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=REG3_PYRHO similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 119.0
  • Bit_score: 89
  • Evalue 3.70e-15
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_16_Thaumarchaeota_49_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 138.0
  • Bit_score: 113
  • Evalue 3.40e-22
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 136.0
  • Bit_score: 89
  • Evalue 1.00e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Thaumarchaeota_49_8_curated → Thaumarchaeota → TACK → Archaea

Sequences

DNA sequence
Length: 408
ATGCCCGAGCTTGACGATGTTGATTCCAGGATACTAGGGATCCTTGTTGAGGACGGGCGTCGGTCTTTTCGTGAGGTCGCTCGTCGCGCTGGCGTAACTACCCCGACTGTTCAAGCCAGAGTCAAACGAATGATGGAAGAGGGTCTCATCCGTAAGATATCTCCGATCTTCGATGTCTCAAAATTCAAGCAAGGCCTGGTATTCCATCTCTATCTCAGGGTCAACCCCGCTGAGATCGAGGAGATCGTTCAGAAGCTCGAGAAAACTACAGAGGTCCGCGGCATCTATCTAACGACAGGAGAAAACAACTTGACGCTCCGAGTCGCGGTCGACAGTCTAGAACAGCTGCAACGCCTCACGGAGACTCTAGACCGGGAGTTCGAGGTCAAGCAGAACTCTAGCCAGATG
PROTEIN sequence
Length: 136
MPELDDVDSRILGILVEDGRRSFREVARRAGVTTPTVQARVKRMMEEGLIRKISPIFDVSKFKQGLVFHLYLRVNPAEIEEIVQKLEKTTEVRGIYLTTGENNLTLRVAVDSLEQLQRLTETLDREFEVKQNSSQM