ggKbase home page

13_1_40cm_3_scaffold_22440_1

Organism: 13_1_40CM_3_Euryarchaeota_66_7

partial RP 25 / 55 MC: 14 BSCG 10 / 51 MC: 1 ASCG 25 / 38 MC: 19
Location: 2..871

Top 3 Functional Annotations

Value Algorithm Source
TruB; H/ACA RNA-protein complex component Cbf5p; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_16_Euryarchaeota_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 289.0
  • Bit_score: 504
  • Evalue 1.10e-139
truB; putative tRNA pseudouridine synthase B (EC:5.4.99.25) similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 289.0
  • Bit_score: 337
  • Evalue 4.70e-90
Probable tRNA pseudouridine synthase B n=1 Tax=Methanobacterium sp. MB1 RepID=U6EAM6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 289.0
  • Bit_score: 337
  • Evalue 1.70e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Euryarchaeota_68_12_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 870
TTCGGGGTGTTCGTCGCGGACAAGCCGCAGGGACCGTCGTCCCACCAGGTGAGCGCGTGGGTGCGGGACCTCCTGGGGCTCCCCCGGGCGGGCCACGCGGGGACGCTCGACCCGCGGGTCACCGGCGTCCTCCCGATCGCGCTCGACAACGCGACCCGCGCCGTGGACGCGATGCTCGAGGGGGACAAGGAATACGTCGGCGTCCTCCAACTGCACCAGGACGTCGAGGAGGCCCGCGTCCGGGCGATGCTCGAGCGGTTCACGGGCGAGGTCTGGCAGACGCCGCCCGTCCGGTCCGCCGTGAAGAGGGAGCTCCGCACCCGGTGGATCTACGAGCTCGAGCCCCTCGAGTTCGACGGCCGGCTCACCCTCTTCCGCACCCGCTGCGAGTCCGGGACGTACATCCGGACCCTGTGCAACGACGTCGGGGAGGCGCTCGGGGTCGGCGGCCACATGCTCGACCTCCGAAGGACGCGGACCGCGACGTTCCCGGAGGCGGAGGCCCACAGCCTCCTCGACCTCAAGGACGCGCACGTCGTGTGGAAGGAGGACGGGGACGAGGCGGGGCTGCGCCGGATCGTGCAGCCGATGGAGAGCCTCCTCCGGCATCTCCCGCAGATCGTCGTGAAGGACACCGCGGTGGACGCGATCTGCCACGGCTCGAACCTCGCGGTGCCGGGGGTCACGAAGCTCTCGCCGGGGATCAAGCGCGGCGACTTGGTCGCGCTCCTCACCGGGAAGGGGGAGGGGGTCGCCCTCGCGAACGCGTCGATGACGACCGACGAGATCGTGATCGCGAAATCGGGGATCGCCGCGGACTCGAAGCGCGTCCTCATGGACCCCGGGACGTACCCGAAACTGTGGAAGTGA
PROTEIN sequence
Length: 290
FGVFVADKPQGPSSHQVSAWVRDLLGLPRAGHAGTLDPRVTGVLPIALDNATRAVDAMLEGDKEYVGVLQLHQDVEEARVRAMLERFTGEVWQTPPVRSAVKRELRTRWIYELEPLEFDGRLTLFRTRCESGTYIRTLCNDVGEALGVGGHMLDLRRTRTATFPEAEAHSLLDLKDAHVVWKEDGDEAGLRRIVQPMESLLRHLPQIVVKDTAVDAICHGSNLAVPGVTKLSPGIKRGDLVALLTGKGEGVALANASMTTDEIVIAKSGIAADSKRVLMDPGTYPKLWK*