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13_1_40cm_3_scaffold_4040_7

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: 4824..5462

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 195.0
  • Bit_score: 285
  • Evalue 4.20e-74
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 205.0
  • Bit_score: 362
  • Evalue 5.00e-97
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 198.0
  • Bit_score: 293
  • Evalue 5.70e-77

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 639
ATGAGAGCAGTCCTCAAGCTCACCACGAAGACCGGCGTGCGGGCCCTGGAGCGGCAGACCCTCCACGAGCTCGCCGACGCCCAGGTGGTGCAGCGGCATCTCGCCAGCGATCCCCAGGCGTTCGGCGCCCTCGTCGACCGCTACCAGAGCCGGCTGCTCAACTTCGTGAACCGCACGATCGGCGATCGCGAGCGCGCGGAGGACCTCGTGCAGGAGGTCTTCATCCGGGTGTTCCGGCACCTGCACCGCTTCGACCAGACCAAGAAGTTCTCGACGTGGATCTACACGATCGCCTCGAACCTCGCGAAGAACGAGCTGCGCAACCGCAGCCGCAACCCGCTGGTGCTGTTCCAGACGATCAAGAAGAACTGGGAGAGCGACCACCGGCCGCTGCAGTTCGAGGACACGAGCGCCCGGCCCGACGACTTGTACCGCAAGCGGTTCCTCAAGGACGCCGTCGAGCAGTGCGTCTGCCACCTCCCGGAGCATCACCGGGTCGTGTTCGTGCTGCGCGAGCTCGAAGGGAAGAGCTACCAGGAGATCGCGGAGATCACGGGCTGCAACCTGGGCACGGTGAAGAGCCGCCTGAACCGCGCCAGGAACAGCTTCGCCCAGTTGATCGGGCCGATGGTGGAATAG
PROTEIN sequence
Length: 213
MRAVLKLTTKTGVRALERQTLHELADAQVVQRHLASDPQAFGALVDRYQSRLLNFVNRTIGDRERAEDLVQEVFIRVFRHLHRFDQTKKFSTWIYTIASNLAKNELRNRSRNPLVLFQTIKKNWESDHRPLQFEDTSARPDDLYRKRFLKDAVEQCVCHLPEHHRVVFVLRELEGKSYQEIAEITGCNLGTVKSRLNRARNSFAQLIGPMVE*