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13_1_40cm_3_scaffold_5076_10

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(9628..10701)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 351.0
  • Bit_score: 530
  • Evalue 1.80e-147
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 359.0
  • Bit_score: 438
  • Evalue 5.00e-120
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 360.0
  • Bit_score: 450
  • Evalue 3.60e-124

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1074
GTGATCACGACTCTCGATTTGACCGGGTTGGTCCACCCGCACGTCGTCGAAATGACCAAGCGGGAGGACAACCCCAACGCCGCCGAGTTCCGGCTCCAGCCGCTCGAGCGCGGCTACGGCTACACGCTCGGCAACTCGCTGCGGCGGATGCTGCTGTCCTCGCTCCGGGGTGCAGCGGTGTGGGCGTTCCGGCTGGACGGTGTGGTGCACGAGCACCAGACCATCCCCGGCGTGGTGGAAGACGTCCACCAGATCATCCAGCGCCTGAAACAGCTCACCCTGGTGCTGGCGCCCGACGTCGACGAAGCGGTGCTGCACATCAAGCGGGACGCGGCCGGCGCCGTCTACGCACGCGACATCGAGCCCCACGGCTCGGTGACCGTCGTCAACCCCGACCATCTGTTGTTCACGCTCCAGGACGAGAAGGACGTGAGCGGCGAGCTGTACGTGAACAAGGGCCGCGGCTACGTCGAAGCGGAGCAACATCCGGTGGACCGGACGCTGCCGGTGGACGTGGTGCGCATCGACTCGATTTACAATCCGGTGCGCCGCGCCAACTTCACCGTGGCGGAAACGCGCGTCGGGCAGCGCACCGACTACGACCGGCTGACGCTGTCGGTCGAGACCAACGGCACCATCTCTCCCGAGGACGCCGTGGCGTACGCCGCCGCCCTCGCGCAGGAGCACTTCCGGTTCTTCGTGGACTTCGGGAAGGTCCCGATGATCGCGGCGCCCGAGACGGTCCCCGGCAACGGCGGCGGCGCGGCGACCGGCCAGCTTCGCGACCTCCTGAACCGCTCCATCGACGACGTCGGCCTGTCGGTCCGCTCGGTCAACTCGTTGAAGAACTCGAACATCCGCACCCTGGCCGACCTGGTGCAGTACCGCGAGGACGACCTCCTCAAGGTCAAGAACGTGGGCGAGAAGGCCCTCGCCGAGATCGCGGAGCTGTTGCGACGCGAAGGCCTCAACTTCGGCATGCGGTTCGAGGACGTGAACGGCGAGCTGCGCGTCGCCGACCCGGGCACGCCGCCGATGGCGCAGCCGGGCGCGGGCGACGACGAGGAGGTCTGA
PROTEIN sequence
Length: 358
VITTLDLTGLVHPHVVEMTKREDNPNAAEFRLQPLERGYGYTLGNSLRRMLLSSLRGAAVWAFRLDGVVHEHQTIPGVVEDVHQIIQRLKQLTLVLAPDVDEAVLHIKRDAAGAVYARDIEPHGSVTVVNPDHLLFTLQDEKDVSGELYVNKGRGYVEAEQHPVDRTLPVDVVRIDSIYNPVRRANFTVAETRVGQRTDYDRLTLSVETNGTISPEDAVAYAAALAQEHFRFFVDFGKVPMIAAPETVPGNGGGAATGQLRDLLNRSIDDVGLSVRSVNSLKNSNIRTLADLVQYREDDLLKVKNVGEKALAEIAELLRREGLNFGMRFEDVNGELRVADPGTPPMAQPGAGDDEEV*