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13_1_40cm_3_scaffold_855_4

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(3420..5135)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 545.0
  • Bit_score: 857
  • Evalue 9.40e-246
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 557.0
  • Bit_score: 879
  • Evalue 1.90e-252
RNA binding S1 domain protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 561.0
  • Bit_score: 863
  • Evalue 3.70e-248

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1716
ATGCTGGCTGAAGCTCGGGACGTGGAATCCCCCACCGAAGGCGCGCCCAAGAAGACGTCTCACCTGCGGGTGCGCACCGACCTGCACGAAGAGTACTCCCCCGAAGAAATCGCCAAGATGACGGAGCTGTACGAGGGGACGCTCTCCAACATCGAGGAAGGCGAGATCGTCAAGTCGAAAGTGCTGCGGGTCACGGACACCGCGGTGATCCTCGACGTGGGTTTCAAGTCAGAGGGGGCCGTCGCGATCGACGAATTCAAGGATCCCAAGAGCCTCAAAGAAGGCGACGAGATCGAGGTCTTCCTCGAGCATCTCGAGGATCAGGAAGGGGCCGTCGTCCTCTCGAAGAAGAAGGCCGACTTCATGCGGGTGTGGGAGCGGATCCGCGAGGCCTACGAGAAGGACGAGCCGGTACAGGGGGCGCTGGTCAAGAAGATCAAGGGCGGGGTGGTGGTGGACCTGATGGGCGTGGACGCCTTCCTGCCGGGCAGCCAGATCGCATTGCGCCGCGTGCCCAACATCGACGAGCTGCTCGGCCAGTCGTTCGAATTCAAGATCATCAAGCTCAACAAGCGGCGCCGCAACATCGTCGTGTCGCGCCGCGTGCTGCTGGAGGCTGAGCGCAAGACCAAGCGCGACGTCCTGATGAAGGAGCTCCAGGTCGCCCAGGTCCGCAAAGGCGTCGTGAAGAACATCACGGATTTCGGCGCGTTCATCGATCTGGGCGGCGTAGATGGACTGCTGCACATCACGGACATGAGCTACGGCCGCGTGTCGCATCCGTCCGAGCTCGTGCGCATCGGGCAGGAGCTCGAAGTGAAGGTGCTGGACATCGACTGGGAGCGCGAGCGTATCAGTCTCGGTTTGAAGCAGCTGCAGACCTACCCGTGGCACGACGTCGCCCAGCGGTATCCGGTCGGCACGCGCGTGCAGGGCAAGGTGGTCTCGATCACCAACTACGGGGCGTTCGTCGAGCTGGAGCCGGGGATCGAAGGCCTCGTGCACATCTCCGAGATGAGCTGGACCCGCAACGTGCGCCATCCGTCGAAGGTCGTGTCGATCGGCGAGACGATCGAAGCCGTGGTGCTCAAGGTGGACGAGACCGAAGAGAAGATCTCCCTCGGCATGAAGCAGACCGAGGAGGATCCGTGGATGGCGCTGCCGCAGAAGTACCCGGTGGGCACGCGGCTCAAGGGCAAGGTGCGGAACCTCACCTCGTTCGGCGCGTTCGTGGAGATCGAGCCGGGGATCGACGGCCTGATCCACATCTCCGACATGTCGTGGACGAAGCGCGTGCAGCACCCCTCCGAAGTGGTGAAGAAGGGCGACGAAGTGGAGGTGCTGGTCCTGAACGTCGACGCCGAAAACAAGCGCATCTCGCTGGGTCTCAAGCAGGCGCAGGAGGATCCCTGGCTGCGCATCGGCGAGACCTACCCCGTCGGCACGGAGCTGCGTGGCCGCGTGTTGCGCCTGATGGACAAGGGGGTGGTGGTGGACATCGGCAACGACATCGAGGGTTTCGTGCCGATGTCGCAGCTGGGCATCCCCGACATCCACAATCCAGGGGAGGCGGTGAAGGAGGCGCAGGCGGTCGAGCTGAAGGTGCTCGAAGTCGACCCGATCCATCACCGCATCGTGCTGGCGGCGACCGGCTTCCCCAAAGAAGACAGTGTCCAGGAGCCAGCAAGACAGGACACGCCACAGCTCGACGCGTAG
PROTEIN sequence
Length: 572
MLAEARDVESPTEGAPKKTSHLRVRTDLHEEYSPEEIAKMTELYEGTLSNIEEGEIVKSKVLRVTDTAVILDVGFKSEGAVAIDEFKDPKSLKEGDEIEVFLEHLEDQEGAVVLSKKKADFMRVWERIREAYEKDEPVQGALVKKIKGGVVVDLMGVDAFLPGSQIALRRVPNIDELLGQSFEFKIIKLNKRRRNIVVSRRVLLEAERKTKRDVLMKELQVAQVRKGVVKNITDFGAFIDLGGVDGLLHITDMSYGRVSHPSELVRIGQELEVKVLDIDWERERISLGLKQLQTYPWHDVAQRYPVGTRVQGKVVSITNYGAFVELEPGIEGLVHISEMSWTRNVRHPSKVVSIGETIEAVVLKVDETEEKISLGMKQTEEDPWMALPQKYPVGTRLKGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDEVEVLVLNVDAENKRISLGLKQAQEDPWLRIGETYPVGTELRGRVLRLMDKGVVVDIGNDIEGFVPMSQLGIPDIHNPGEAVKEAQAVELKVLEVDPIHHRIVLAATGFPKEDSVQEPARQDTPQLDA*