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13_1_40cm_3_scaffold_2914_9

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(8029..8850)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K09690 lipopolysaccharide transport system permease protein id=12557474 bin=CNBR_ACIDO species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 265.0
  • Bit_score: 338
  • Evalue 7.00e-90
  • rbh
ABC-2 type transporter; K09690 lipopolysaccharide transport system permease protein Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 275.0
  • Bit_score: 253
  • Evalue 2.40e-64
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 263.0
  • Bit_score: 193
  • Evalue 6.00e-47

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_36_27_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGCGAACCGTCTCTGTACTTCCCGCACGCCTGGTGGCCGACGTCCGCGAGATGGTCGTCGAGCAGCGCGAGTATCGCGAGCTGCTGGTGCGCATCACCGCGCGCGACCTCCTGCTGCGATACAAGCAGACGGTCATGGGGTTCGGCTGGGCGATCTTCATGCCGCTCGTCAACACCGCCGTCTTCTCGGTGATCTTCACGCGCGTGGCCCCGATCGAGACGGCCGTCCCGTATCCCTTGTTCGCGTACTGCGGCCTGTGCACGTGGAACTTCTTCGCGTCCACCCAGCGATTCGCGGTCGTGTCGCTGACGAGCAACACGAGTCTCGTGACCAAGGTGTACTGCCCGCGGGAGATTTTTCCCTTTTCGGCGATTCTGGTGTCGCTCGTGGACTTCGCGGTCGCCTCGACGGTGCTCGTCGGTCTGATGGCGTATTACCGCATCCCCGTCGGATGGCCGCTCGTGTTCGTGCCCGTCATCGTCGCGGTCCACGTCGCGTTCACAGCGGGCGTCGCGCTCTTCCTCGCGATGGCGAACCTGTTCTACCGCGACATCAAGTACCTGTTCGAGATCGTCCTGGCGGTTTGGATGTTCGCGACGTCGGTCGTCTATCCGATCGAGCGCATCGGCGGCCGCCTGGGCACGCTGCTCCTGCTCAACCCGATGACGCCGATCATCGACGCCTATCGCGCCACGCTGCTCGAACGGCAGCTCCCGGCGATGGGACCGTTCGCGGCGGCGGCGGCGGTGTCGGTCGCGCTCCTGGCGATCGCGTGGCTGCTCTTCCATCGCGCCGAATTCCAGTTTGCGGAAAACGTCTGA
PROTEIN sequence
Length: 274
MRTVSVLPARLVADVREMVVEQREYRELLVRITARDLLLRYKQTVMGFGWAIFMPLVNTAVFSVIFTRVAPIETAVPYPLFAYCGLCTWNFFASTQRFAVVSLTSNTSLVTKVYCPREIFPFSAILVSLVDFAVASTVLVGLMAYYRIPVGWPLVFVPVIVAVHVAFTAGVALFLAMANLFYRDIKYLFEIVLAVWMFATSVVYPIERIGGRLGTLLLLNPMTPIIDAYRATLLERQLPAMGPFAAAAAVSVALLAIAWLLFHRAEFQFAENV*