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13_2_20cm_scaffold_1519_8

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(5130..7388)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 729.0
  • Bit_score: 1020
  • Evalue 1.20e-294
Response regulator receiver protein id=4816030 bin=GWA2_Elusi_like_61_42 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi similarity UNIREF
DB: UNIREF100
  • Identity: 37.7
  • Coverage: 762.0
  • Bit_score: 500
  • Evalue 2.30e-138
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 505.0
  • Bit_score: 434
  • Evalue 5.60e-119

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 2259
ATGGCAGATACGCATTTTCCGGACGAGTGGCTGGCGCACTCCCTCGGGGACGTCCTCCCGCCGGATCGGCTCCTGGAGCTGCGGGGCAAGGCCGCGCCCGGCGCCACCCTGTGGGAGTGCGTCGTCGCTGAGAAGCTTGCGACCGACGAGCAGATCCTCACCGCGCTCTCGACCCGGTTCCGGTTGAAGCTCGCCGACGTCCGGCTAATCGAGCCCTCGGTGAAGGAGAAAGTGCCGGAGCAGCTGGCCCGCCGCTTTCACGTGCTGCCGCTCCGCGTCACCGATTCCTATCTCGAGGTGGCGACGGCCAACCCGTTCGATCTCGACGCCGAGAAGGCGCTCGCGTTCGCCACGGCGCGCGAGGTGCGCACGTTGTTGCTCGCGCCCTCGAAGATCTCCGAGAAGCTGGACGAGCTGTATCGCCCGGAGAAGGCGGTCGACAAGCTGCTCCAGGGGATGGAAGGCTCGGCCGAGCTGGTGCAGCTCGCCGACCAGCCGGCGCCGGAGGAGATCGCGATCTCCGAGGCCGAAGCGAGCCAGCGGCCGGTGGTGCGGCTCGTGGACCTGATCATCTCCGAGGGGATCCTGGCGCGCTCGAGCGACATCCACATCGAGCCGGAAGAGGGCGGGGTGGCGGTGCGCTATCGCATCGACGGCGTGCTGCGCCAGGTGATGAAGATTCCGCGCCAGGCGGGGCTGCCGCTCATCTCGCGCATCAAGATCATGTCGTCGCTAGACATCGCCGACCGGCTGCGGCCCCAGGACGGGCGCGCCCGCGTGGCGGTGAACGGGCAGCCCATCGATCTCCGGGTCTCGACGCTCCCCGCCCAGCTGGGCGAGAAGGTCGTGATCCGGATTCTCGATTCCCGCGCCACGGTGAAGTCGCTCGACTCGCTCGGCCTGAATACGAGCGAGATCGAGGGCATCAAGCGTCTGCTCGAGAACCACGAGGGGATCATCCTCGTCACCGGCCCGACCGGGTCGGGAAAGACCACCACGCTCTACTCCTGCATCAACCTGATCAAGAGTGAGGGCGTGAACATCGTCACCGTGGAGGATCCGGTCGAGTACCGGATGCAGGGGATCGTGCAGGTGCAGGTGCAGGAGAAGGCCGGGCTCACCTTCGCCGCCGCGCTGCGCTCGATCCTGCGGCAGGACCCGAACGTGGTGCTCGTGGGCGAGATCCGTGACCGCGAGACTGCGCAGATCGCCGTGCAGGCGTCGCTCACGGGCCATCTCGTGCTCTCGACCCTGCATACCAACGACGCCGCCAACGCGGTCACCCGCCTCGTGGACATCGGCATCGAGGCCTACAAGATCGCCGCGGCGCTGCGCGGCGTGGTCGCGCAGCGGCTGATGCGCCGGTTGTGCACCACCTGCAAGGAAGTGTGGATGGAGACGCCGCCCGACCGGCTCAAGCGGTGGATCCCCAAGGGGACGCCGCTGTATCGCGCGGCGGGCTGCCCGGACTGCGCCATGACGGGCTACCGCAGCCGCTTTTCGATCGTGGAGGTGTTGCCGGTCACGCCCGAGGTGGAGCGCCGCGTCGCGGCGGGCGAGACCGCCGAGCACATCGCCGCCGCGGCGCGGCGGGCCGGCATGAAGGGCCTGTGGGACTCGGGGCTGGCGCACGTGCTGCGGGGCGAGTCCACCGTCGACGAGCTGATGCGCGTGGTGGACGTGCCCCAGGAGGACGACACCGTGGCGCCGTCGCCCGTGGAGAGCGGCCGCCGCCCGTCGGGAAAGATCCCCCAACCGCGCTACTCGCCGGTGCCGGGGACGATCGCGGCCCAGCCGCCGCCCGGGGCGCCCGCGCCGCTGACGACGCACTTCGAGCTGCTCGAGGAGCCGCCGGCGCCGCGACGCTCGGGGCCGCACGGGGAGATCGCCGTCAAGGTGCTGCTCGTGGACGACGAGGACAGCCTGCGCAAGGTGATGCGCGACCTGCTCGAGCGGGACGGCTACGCGGTGACGGAAGCGCGCGACGGCGTGCAGGCACTCGACCAGGTGGACCGCGTGGGGCCGGACATCATCGTGCTGGACCTCAACCTGCCGGGCCTGGACGGCTACGGCGTGTTGTCGCACCTGCGCTCGCGCCCCGCCACGGCCGATATCCCGGTGATCGTGCTGACCGCGAAGGGCGACGAGGACAACGAAGTCCGCGTGTTCGAGCTCGGCGCCGACGACTTCCTGACGAAGCCGTTCCGTGCCCGCGCGCTGTCGGCGCGGCTCGAAGCCGTGCTGGGCCGCCGGCGGTAG
PROTEIN sequence
Length: 753
MADTHFPDEWLAHSLGDVLPPDRLLELRGKAAPGATLWECVVAEKLATDEQILTALSTRFRLKLADVRLIEPSVKEKVPEQLARRFHVLPLRVTDSYLEVATANPFDLDAEKALAFATAREVRTLLLAPSKISEKLDELYRPEKAVDKLLQGMEGSAELVQLADQPAPEEIAISEAEASQRPVVRLVDLIISEGILARSSDIHIEPEEGGVAVRYRIDGVLRQVMKIPRQAGLPLISRIKIMSSLDIADRLRPQDGRARVAVNGQPIDLRVSTLPAQLGEKVVIRILDSRATVKSLDSLGLNTSEIEGIKRLLENHEGIILVTGPTGSGKTTTLYSCINLIKSEGVNIVTVEDPVEYRMQGIVQVQVQEKAGLTFAAALRSILRQDPNVVLVGEIRDRETAQIAVQASLTGHLVLSTLHTNDAANAVTRLVDIGIEAYKIAAALRGVVAQRLMRRLCTTCKEVWMETPPDRLKRWIPKGTPLYRAAGCPDCAMTGYRSRFSIVEVLPVTPEVERRVAAGETAEHIAAAARRAGMKGLWDSGLAHVLRGESTVDELMRVVDVPQEDDTVAPSPVESGRRPSGKIPQPRYSPVPGTIAAQPPPGAPAPLTTHFELLEEPPAPRRSGPHGEIAVKVLLVDDEDSLRKVMRDLLERDGYAVTEARDGVQALDQVDRVGPDIIVLDLNLPGLDGYGVLSHLRSRPATADIPVIVLTAKGDEDNEVRVFELGADDFLTKPFRARALSARLEAVLGRRR*