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13_2_20cm_scaffold_2283_5

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: 5896..6504

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 177.0
  • Bit_score: 142
  • Evalue 5.50e-31
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 178.0
  • Bit_score: 228
  • Evalue 8.10e-57
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 197.0
  • Bit_score: 153
  • Evalue 8.70e-35

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGACTGACCCCCCTGACCCCCCTGCCCCCCTCCCCCAACCCCCGGGGGAGGCCGCGCGTATAGGTCAGCAGAACGAAGCGGACCTGGTCGCCCGCGCGCTGGCCGGCGACCGCGCGGCGTTCGGCACGCTCGTCGAGCGCTACGCGGCCACCGCGCGCCGCGTGGCGCGCGCCGTGCTGGGCGACCCCGATGACGCCGACGACGCAGCCCAGGACGGCATGCTGTCGGCGCTCCTGAAGCTGGAGCAGTACGACCCACGCCGGCCGTTCGGGCCGTGGTTGCTGCGCATCGTCGCGAACGCGGCCACGGATCGCCGCCGGCGGCGCACCGTGCGGCGCGTGGAGCCGCTCGACCCGGGGCTCGTCGCCGGCGGCGTGCGCCCTGACCGGACGGCGGAACGCCGGGCGCTGGCGCAACGGCTGCGGGAGGCGCTCGCGGAGCTGCCCGAGCGACGGCGCGTCGCGGTCGTGCTGTTCGACGTCGAGGGCTATTCGCACGCGGAGATCGCCGACGTCCTCGGGATTCCCGAAGGCACGGTGCGCTCCGAAGTGTTCCACGCGCGGCGGCGGTTGCGCGCGCTGCTCGGGGATTGGAAGGAGGACGCATGA
PROTEIN sequence
Length: 203
MTDPPDPPAPLPQPPGEAARIGQQNEADLVARALAGDRAAFGTLVERYAATARRVARAVLGDPDDADDAAQDGMLSALLKLEQYDPRRPFGPWLLRIVANAATDRRRRRTVRRVEPLDPGLVAGGVRPDRTAERRALAQRLREALAELPERRRVAVVLFDVEGYSHAEIADVLGIPEGTVRSEVFHARRRLRALLGDWKEDA*