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13_2_20cm_scaffold_235_5

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(4382..5482)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 365.0
  • Bit_score: 388
  • Evalue 7.90e-105
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 350.0
  • Bit_score: 504
  • Evalue 1.10e-139
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 57.8
  • Coverage: 365.0
  • Bit_score: 388
  • Evalue 2.20e-105

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1101
ATGACGGACGACGCATTACACTGCAGAGGAGCTCTCCTGACCCCCATCACCGGCTGGTTCGACCCCGCCCCGAAGGGCGGCTCGCTGCGCCTCGCGGCGAACAGCTACCTCCCCGCGCGGGGCGACCCCGCCGTCCGGTTGCCGGGGCTGCGCCGCGGCGACCTCGTGACGCTCGAGAACGACCGCGTGACGCGCGTGAACGGCGCCCCCCCGGAGCGGCTCGCGGAGCGCCCCGAGTTCGCCAAGCTGGGCGCCGTGCATCCGTCGCGGCCGTTGCTGCTCGAGACCGCGCAGGCCTCGAGCCCGCGCACCGCCGAGATCCAGCGCGTCGTCGATCTCGTGTGCCCCTTCGGCTTCGGCCAGCGCGCGCTGATCGTCTCCCCGCCCAAGGCCGGGAAGACGGTGATGCTGCAGGCGATCGCCGAAGGGATCGCCCTCAACCATCCCACGGCGATCCTCCTCATCCTGCTCGTCGACGAGCGGCCCGAAGAGGTGAGCGAGATGATCGACTGGGGCCGCGGCGAGGTGATCGCATCGAGCTTCGACCTGCCGCATGAGCGGCACGTCGCGGTGGCCGACATGGTGTTCGAGCACGCACGACGCCAGGTCGAGCTCGGCAAGGACGCCGTGATCGTGCTCGACTCGCTCACGCGGCTCGCGCGCTCGCACAACACGACCGGGCGCGCGAGCGGCCGGACGATGTCGGGAGGGCTCGACGCCAACGCCCTCGCCAAGCCCAAAGCGCTCTTCGGCGCGGCGCGCGCCGTGCCGACGGGGGGGTCGCTCAGCGTGATCGCCACCGCGCTCGTCGAGACGGAGAGCCGCATGGACGACGTGATATTCGAAGAGTTCAAGGGGACGGGCAACGCGGAGCTGCGACTGGTGCGCGCCCTCGCCGATCGGCGGATCTACCCGGCGGTGGACATCGCGGCGAGCGGGACGCGACGGGAAGAGCTGCTCGCCGAGCCCCCGACCGTGGCCGCGAAGCAGAACCTCCGGCGTGGCCTCGTCGGGCTGCCGCCGGAGAAGGGGATGGAAGTACTGCTCACCCAGCTGCGCCGCGCCAGGACGAACGCGGAGCTGTTGAAAGCGACGCCCTAA
PROTEIN sequence
Length: 367
MTDDALHCRGALLTPITGWFDPAPKGGSLRLAANSYLPARGDPAVRLPGLRRGDLVTLENDRVTRVNGAPPERLAERPEFAKLGAVHPSRPLLLETAQASSPRTAEIQRVVDLVCPFGFGQRALIVSPPKAGKTVMLQAIAEGIALNHPTAILLILLVDERPEEVSEMIDWGRGEVIASSFDLPHERHVAVADMVFEHARRQVELGKDAVIVLDSLTRLARSHNTTGRASGRTMSGGLDANALAKPKALFGAARAVPTGGSLSVIATALVETESRMDDVIFEEFKGTGNAELRLVRALADRRIYPAVDIAASGTRREELLAEPPTVAAKQNLRRGLVGLPPEKGMEVLLTQLRRARTNAELLKATP*