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13_2_20cm_scaffold_2581_15

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(10683..11291)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYD9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 207.0
  • Bit_score: 118
  • Evalue 6.50e-24
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 175.0
  • Bit_score: 177
  • Evalue 1.60e-41
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 208.0
  • Bit_score: 131
  • Evalue 3.60e-28

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGAGAGCCGTGTCTCCCCTCCCCCCCGACTCGGACGGCCCACCGGGGAGGCCGGGAGAGGCGCGGTCCGCGGAGGAAGAGTCCGCGCTCGTGGCGCGCGTCCTGGCGGGTGATCACGAAGCACTGGGGCAGCTCGTGGCTCCGTATGTGGGGTCGCTGCGCCGCCTCGCCCGCGCCATCCTCGGCGACGTCGATGACGCGGACGACGCGGCGCAGGATGCGCTGCTCCTCGCGCTCGTGAAGCTCGACCAGTTCGACCGCTCCCGCCGGTTCGGGCCGTGGTTGATGCGGATCGTGACGAACGCGGCGATCGACCGCCGCCGCCGGCGCCGGGTGCGGGTGGCGGGCGGTTTGGACGAAGAGGTCGCGGACGACGATCCGCTCCCCGACGCCGAAACGGAGCGGGTGGTCTTGGGGGAGCGGCTGGAGGCGGCCCTGGAACAGCTGCCGGCGCGGTATCGGACGGCGCTGGTGCTGTTCGACGTCGAGGGCTACTCGCACGGCGAGATCGCCGAGATGCTGGGCGTGGCGCCGGGGACGGTGCGCTCGGCGGTGTTCCACGCCCGCCGCCGGCTGCGGCGGCTGCTCGCGGACTGGAGGGTAAGGTGA
PROTEIN sequence
Length: 203
MRAVSPLPPDSDGPPGRPGEARSAEEESALVARVLAGDHEALGQLVAPYVGSLRRLARAILGDVDDADDAAQDALLLALVKLDQFDRSRRFGPWLMRIVTNAAIDRRRRRRVRVAGGLDEEVADDDPLPDAETERVVLGERLEAALEQLPARYRTALVLFDVEGYSHGEIAEMLGVAPGTVRSAVFHARRRLRRLLADWRVR*