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13_2_20cm_scaffold_4614_7

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(4223..5602)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 459.0
  • Bit_score: 727
  • Evalue 9.70e-207
RNA-splicing ligase RtcB n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8L0_PELCD similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 460.0
  • Bit_score: 584
  • Evalue 9.50e-164
tRNA-splicing ligase similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 462.0
  • Bit_score: 590
  • Evalue 4.90e-166

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1380
ATGCGGACCGAGGGGTTGATCTTCGCGGACGCCGAGCTGATGCGCGACCTCGAGGGTGACCAGAGCGTCCAGCAAGTCGCGAACGTCGCCCACCTTCCCGGGATCGTGGGACCCGCGATCGCCATGCCGGACATCCACTGGGGATACGGGTTCCCGATCGGAGGCGTGGCCGCCTTCGACGAGGAGGAGGGCGTCGTTTCACCCGGCGGTGTGGGCTACGACATCAACTGCGGCGTGCGGCTGCTGGTCGCCCCGCTCGGGATCGCCGATGTGCGCCCGCGCCTCGCGCAGCTCGTGGACGCGCTGTTCGCCACCATCCCCTCCGGCGTGGGCGCCTCGCGTTCCGACGTGAAGCTCGGACGCCGTGACTTGGAGCGGGTGCTCAGCCAAGGCGCCCGCTGGGCGGTGGAGCAGGGGTACGGCTTCCCGGGCGATCTCGAGGCGATCGAGGCGAACGGCGAGCTGCCGGCCGCGGACCCGGACGCGGTGTCGGAGCGCGCCAAGGAGCGCGGCAAGAGCCAGCTCGGCACCGTGGGCAGCGGCAATCACTTCGTGGAAGTCGGTTACGTGGCGGAGACGTTCGACGCCGCCGTGGCCCAGCGGCTCGGACTCGAGCCCGGCCGGCTCACCGTCTTCATCCACTCGGGCTCGCGCGGCCTGGGTTACCAGGTGTGCGATGACTCCCTCGACGGCATGATCAGGGCCGCGGCGAAGTACGCCATTCCGCTGCCGGACCGCCAGCTGTGCTGCGCGCCGCTCTCCTCGCCCGAGGCGCGTGCCTATTGGGGCGCGATGAACGCAGCGGCCAACTACGCGTTCGCCAACCGCCAGCTGATGGCGCACTACGCGCGCCTCGCGCTGGGCAAGGTATTCGGCCCCGACGCCGCCGAGCGCACGCGCCTGGTATACGACGTGTGCCACAACATCGCGAAGCACGAGACCCACGAGGTGGACGGCCGGTCACGGCGGCTGTGCGTCCACCGCAAGGGCGCGACCCGCGCCTTCCCCCCGGGGCACGCCGAGCTCGCGCCGCAGTTCCGGGACATCGGCCAGCCGGTGCTGATCCCGGGCGACATGGGGCGGTACTCCTACGTGCTCGTCGGGACGGCCGGAGCGTTCCGGGAGACGTTTGGATCCAGCTGTCACGGCGCGGGACGGCGCCTCTCCCGACACAAGGCCAAACAGCTCGCCCGGCCCCGCAATATTCCGAAGGAGCTCGAGGCACGGGGCATCGTGGTGCGTGCGGCGACCCGCGCCACGGTGGACGAGGAGATGCCGGAAGCCTACAAAGATGTGGCCCGGGTCGTGGACGTCGTGCACGCCGCGGGGATCGGCCGGAAAGTGGCGCAGCTCCGGCCGGTGGGGGTCGTCAAGGGCTAG
PROTEIN sequence
Length: 460
MRTEGLIFADAELMRDLEGDQSVQQVANVAHLPGIVGPAIAMPDIHWGYGFPIGGVAAFDEEEGVVSPGGVGYDINCGVRLLVAPLGIADVRPRLAQLVDALFATIPSGVGASRSDVKLGRRDLERVLSQGARWAVEQGYGFPGDLEAIEANGELPAADPDAVSERAKERGKSQLGTVGSGNHFVEVGYVAETFDAAVAQRLGLEPGRLTVFIHSGSRGLGYQVCDDSLDGMIRAAAKYAIPLPDRQLCCAPLSSPEARAYWGAMNAAANYAFANRQLMAHYARLALGKVFGPDAAERTRLVYDVCHNIAKHETHEVDGRSRRLCVHRKGATRAFPPGHAELAPQFRDIGQPVLIPGDMGRYSYVLVGTAGAFRETFGSSCHGAGRRLSRHKAKQLARPRNIPKELEARGIVVRAATRATVDEEMPEAYKDVARVVDVVHAAGIGRKVAQLRPVGVVKG*