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13_2_20cm_scaffold_503_5

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(2225..2866)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4520552 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 199.0
  • Bit_score: 195
  • Evalue 5.80e-47
rpoE; ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 199.0
  • Bit_score: 195
  • Evalue 8.10e-47
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 179.0
  • Bit_score: 184
  • Evalue 3.70e-44

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Taxonomy

R_Ignavibacteria_55_14 → Ignavibacteriales → Ignavibacteria → Ignavibacteriae → Bacteria

Sequences

DNA sequence
Length: 642
ATGGCGACGCCCACGACCCCCCCATCCCCCCCGTCCCCGCCATCCCCCCCGGTCCCCACCCCGGCGCCGCTGAGTCCGGCGGACGAGGCCGAAAAGCGGACGAGCTTCGAGCGCGAAGCGCTGGTCCACCTCGACAGCCTGTACCGCGTCGCCCTCCGCCTCACCGGCAACGCCGCCGAGGCGGACGACCTGGTGCAGGAAACGATGCTGAAGGCCTACCGCGCGTGGGAGCAGTACCAGAAGGGGACCAATGCGAAGGGATGGCTGCTGACCATCCTGCGGCACGCTTTCATTAATGAATACCGGCGCCGCACGCGCCACCCGGAGACGGTGGACCTGGACGCGATCGAGCCCTTCTCCGTGTTCGAGGAGCTCCAGGACGAAGACCCCCAGGGGACCTTCTTCGACCGCATCGTGGACGACGAGGTGCTGCGGGCGATCGACCAGCTCCCGGAACAATTTCGGGAGACGGTGGTGTTGAGTGACGTCGAGGGGCTGTCGTACGAGGAGATCGCCCGGGTGCTGGACGTGCCCGTCGGCACCGTGAAGTCCCGGCTGTTCCGGGCGCGGCGGCTGCTGCAACAGCAACTGTACGACTACGCCGTCGGGATGGGATACATCAAGGGGAGCTCAACGGGATGA
PROTEIN sequence
Length: 214
MATPTTPPSPPSPPSPPVPTPAPLSPADEAEKRTSFEREALVHLDSLYRVALRLTGNAAEADDLVQETMLKAYRAWEQYQKGTNAKGWLLTILRHAFINEYRRRTRHPETVDLDAIEPFSVFEELQDEDPQGTFFDRIVDDEVLRAIDQLPEQFRETVVLSDVEGLSYEEIARVLDVPVGTVKSRLFRARRLLQQQLYDYAVGMGYIKGSSTG*