ggKbase home page

13_2_20cm_scaffold_1765_8

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: 4684..5553

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Q1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 286.0
  • Bit_score: 492
  • Evalue 3.10e-136
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 289.0
  • Bit_score: 557
  • Evalue 1.10e-155
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 272.0
  • Bit_score: 368
  • Evalue 1.50e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 870
ATGAAAAAAAGTTATATGGCTGCTGAAGATAGCGATACCGGAATTAAGATTTACCTGCGCGAGATCGGGCAAATCCCACTTTTGACTCCGGATCAGGAAATCGAACTGGCCGCTAAGATTAAAAAAGGCGATCGCGAGGCGCGAGCGCTTATGATTCGGTCAAACTTGCGTCTGGTCGTCAAGATCGCGCACGATTACGCCAATCTCGGATTGCCGCTTCTCGACCTGATCTCAGAAGGAAACATTGGCCTGATGAAGGCCGTGGAACGTTTCGACCCCGCAAAGGGCGGGAAACTTAGCACATACGCCGCATGGTGGATCAAACAATCCATCAAACGGGCGCTGGCGAACCAGAGCAAGACGATCCGTCTGCCTGTGCATCTGGTGGATAAGATCTCCAAGATGCGCCGGGTTTCTCTGCAGATGAGTGAGGAGCTTGGCCGCGAGCCGACTGACGAGGAACTGGGTGACGAAATTGGAATTGCCAGCGGAAAAGTCTCCCAACTAAAAACGGTGTCGATCCGCCCAGCGTCGCTCGATGCGCCGATTAGTGACGACGATTCTACCGAGTTCGGCGAGATTGTTGGTGACGAGGACGCACAAACGCCGTTTGAACTGTTGCGCGACAAAAATCTCCGCAACGAAGTCGGCGGGCTGCTTGACGTGCTTGACGATCGGGAGAAGAAAATCATTTTCCAGCGCTTTGGACTAGACGGCGGCAAACCGAAGACGCTCGAGGAAGTGGGCAAGAAATTCGGCGTCACGCGCGAGCGGATTCGCCAGTTGCAAAACATCGCGCTGTCGAAGTTGCGCCGCGCGCTCAGTAAAAAGGAGCGCCCCGTGGACGTCGAGTTGCCGGTGGAAGCTTAA
PROTEIN sequence
Length: 290
MKKSYMAAEDSDTGIKIYLREIGQIPLLTPDQEIELAAKIKKGDREARALMIRSNLRLVVKIAHDYANLGLPLLDLISEGNIGLMKAVERFDPAKGGKLSTYAAWWIKQSIKRALANQSKTIRLPVHLVDKISKMRRVSLQMSEELGREPTDEELGDEIGIASGKVSQLKTVSIRPASLDAPISDDDSTEFGEIVGDEDAQTPFELLRDKNLRNEVGGLLDVLDDREKKIIFQRFGLDGGKPKTLEEVGKKFGVTRERIRQLQNIALSKLRRALSKKERPVDVELPVEA*