ggKbase home page

13_2_20cm_scaffold_19978_3

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(1067..1651)

Top 3 Functional Annotations

Value Algorithm Source
LexA repressor {ECO:0000256|RuleBase:RU003992, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.- {ECO:0000256|SAAS:SAAS00273293};; EC=3.4.21.88 {ECO:0000256|RuleBase:RU003992, ECO:0000256|SAAS:SAAS00008054} similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 202.0
  • Bit_score: 163
  • Evalue 4.00e-37
heme-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744342 similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 203.0
  • Bit_score: 170
  • Evalue 2.40e-39
LexA family transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 208.0
  • Bit_score: 124
  • Evalue 2.40e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 585
ATGCTGACCGACCGCCAACGAAGTGTGCTTGATTTTATTCAGAGCGAGCAACGCGAGAAAGGCATTACCCCCAGCACACGCGAAATCCAAAATCATTTTGGCTTCGCCAGCCAGACGTCGGTCATGCAATACCTTTCCACCCTCGAGCGCAAAGGTTTTCTCGATCGTCACGCCCGCAAAGCGCGTGCTCTCGTCACCCCGGTGCAAAAAGTCCGGATCACTGATATCCCGATTTACGGACAGATCCCGGCCGGCATGGCAACATTGACCGAGCAAACTGTGTTGGGCCACGTTTCGCTCGATGCTCGTTCGGCTAATGCCTCCAGGAATGTGATTCTGGACGATCGCAAGGAAGCACGAAATGGCGACATCGTGGCGGCCCTGATCGATGGCGAGACGACGCTGAAACGCTTTGTCATCGAACACGGACGGCCTTATCTGCGGGCGGAAAACCCGCGCTATCCCGACCAGCGCCCGGCCCATGATCTGCGGATTCAAGGCGTAATGGTGTCGCTGATCCGACGACAACCCAACGGGGGAACCAGACAGCAGGCATCATCCGCTAAACACGCCAAAGGACACTAG
PROTEIN sequence
Length: 195
MLTDRQRSVLDFIQSEQREKGITPSTREIQNHFGFASQTSVMQYLSTLERKGFLDRHARKARALVTPVQKVRITDIPIYGQIPAGMATLTEQTVLGHVSLDARSANASRNVILDDRKEARNGDIVAALIDGETTLKRFVIEHGRPYLRAENPRYPDQRPAHDLRIQGVMVSLIRRQPNGGTRQQASSAKHAKGH*