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13_2_20cm_scaffold_2479_4

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(3455..4024)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU29_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 173.0
  • Bit_score: 144
  • Evalue 1.00e-31
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 175.0
  • Bit_score: 152
  • Evalue 6.90e-34
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 165.0
  • Bit_score: 139
  • Evalue 7.20e-31

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 570
ATGAGCGAGAAAAATTTCGATCACATAGACAAATTCATCGGCTGGCGGCGTCTTGGGAATGAAGACCGTGAAAAGGTCATGGACAACATCGCAAACCATGAGAATTGGAAGAGTTGCTTTTCTGAAATCGGTCCGGGCCTGCTGCTTTTTGCCCGGCAATGGACACGATCGGCATCTGACGCCGAAGACATTGTCCAGGAAGCTTTCGTCAAGTTTTGGCGGCGAAACCACAGGATCGATAACCGAGCACTCCTTTACGCAACTGTGCGTTCGATCGCTCTCGACTTTATTCGTCGCGACAAACGCCGCGCCCGACGCGAGGCCACTGTTTTTGCCGACGCCGATTCAACCGTCGAACCGCAGTTTGAATGGGAAGATGAGGCGCAATCGGCACTCGCCGCGGCAGTCAACTGCTTGCCACACGACCAACGCGAGGTGCTCGTGTTGAAAATCTGGAACGAACTCACCTTTAGCGAGATCGCCGATGCACTCGGCATTTCTCAAAATACTGCGGCGTCGCGATATCGATACGCGCTGGCTAACCTGAAGAAAAGCTTGCAACCTCAATGA
PROTEIN sequence
Length: 190
MSEKNFDHIDKFIGWRRLGNEDREKVMDNIANHENWKSCFSEIGPGLLLFARQWTRSASDAEDIVQEAFVKFWRRNHRIDNRALLYATVRSIALDFIRRDKRRARREATVFADADSTVEPQFEWEDEAQSALAAAVNCLPHDQREVLVLKIWNELTFSEIADALGISQNTAASRYRYALANLKKSLQPQ*