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13_2_20cm_scaffold_4170_3

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(3602..4546)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 258.0
  • Bit_score: 195
  • Evalue 6.50e-47
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49139.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 271.0
  • Bit_score: 475
  • Evalue 5.90e-131
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 250.0
  • Bit_score: 180
  • Evalue 1.00e-42

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 945
GTGGGTTCGAGCCCCTCCGCCGGCAAACCGTCTAACCCTATCTCTTGCGAGAGAGAATTAATCAGTTATCGCACCGGCAAACTTCGCATCCGCGCGAAGGCAGGCAACTGCGGTGGCGCGACGTATTCACCGTTTATTGCTTGTATAGAAGAGCGAGAACCCACATGTTCTCTCGTGAACGGGAAGGCTGGCGACCGGGGTGAAGATGGACCTGGCGAGTTTGTAACTACCCGCTGGAGCCTTATCCTTTCCGCCGCCAACGGAAGCGAAGAACAAAAGGCGCGCGACGCGCTGGCCGAGCTTTGCCGAACTTATTGGCGACCCGTTTTCTCGTTCGTCTGCAGACACGGCTATTCCACACAGGACGCGCAGGACCTTACGCAGGATTTTTTTATGACCATTCTGAAGAAAAATTGGTTGCACCACGCCGATCGAAGTCGCGGTCGGTTCCGCTCGCTGTTGCTCAAGTCGCTCCAAAATTTTCTTGTTAACGCCACCGAGAAATCACATGCCCACAAACGCGGCGGCGGCGCGGAATTTATTTCCTGGGACGATTGGATGGCGGAAGCGCAGTCGCAATTGTCCATCCCAATTCAAGCACTCGACTCCGTGCCGCCGGAGCGCATCTTCGACCTCGCTTGGGCGACGACGGTTGTGGAACACGCGTTTCAACGCCTGCGGGAAGAATGCGAGAGCAGAGGCAAGCTCTGGCTTTTCCAAGCACTAAGCTCCCATCTTACTGATGAACGCGATGAACTGTCATATGCCAATCTATCTGCGGAATTGGAAATGGCGGAGACGGCCGTGAAAAAACAGCTGCACAACATGCGCCAGCGTTACCGCAGTCTGCTGCGCGATGAAGTCTCACGCACGGTCCAAAATCCTGCCGACGTAGATGACGAGATCCGGTATCTGTGTGCAGCGCTCGCAGGAAGAACCGCGTAA
PROTEIN sequence
Length: 315
VGSSPSAGKPSNPISCERELISYRTGKLRIRAKAGNCGGATYSPFIACIEEREPTCSLVNGKAGDRGEDGPGEFVTTRWSLILSAANGSEEQKARDALAELCRTYWRPVFSFVCRHGYSTQDAQDLTQDFFMTILKKNWLHHADRSRGRFRSLLLKSLQNFLVNATEKSHAHKRGGGAEFISWDDWMAEAQSQLSIPIQALDSVPPERIFDLAWATTVVEHAFQRLREECESRGKLWLFQALSSHLTDERDELSYANLSAELEMAETAVKKQLHNMRQRYRSLLRDEVSRTVQNPADVDDEIRYLCAALAGRTA*