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13_2_20cm_scaffold_8018_3

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: 2884..3429

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 192
  • Evalue 4.10e-46
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428 similarity UNIPROT
DB: UniProtKB
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 192
  • Evalue 5.80e-46
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 171.0
  • Bit_score: 133
  • Evalue 8.40e-29

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 546
ATGGAGGGCATTCAGCGAGAAGACCCAGAAGCTTTGTCGCTGCTTTACGATCGCTATAACGGCATTCTGAAAGCGCTGATCCTACGGGTGGTCCACAACGAAGCGGAGGCAGACGACTTGCTGCAGGAGATATTCATGGAGATTTGGAACCAGGCCAAAAACTTCTCGGCCCAGAGAGGCAAACCCCTTGGCTGGATGGTAACGCTGGCGCGTCGCCGCGCAATCGACGGTTTGCGTAAAAAGCAAGCTTATGTCCGAGCAGAGGAGCGTTTACAACAGGAGACTGAACAACAGCCCGATGCCTGGGTCCACAATTCGACGGAGCAAGAAATTCTCGATGGCGACCGGGGCGTTTTGATCCGGCGGGTCATCGGAGTGCTCCCGCCTGCGCAACAACAAGCCATCGAACTATCATTTTTTCGCGGGATGAGTCAGCGCGAAATCGCCGCAAAAACGAATACACCACTGGGCACTGTGAAAACGCGCCTGGAATTAGGCCTCAAGAAGATTTACGACGGCCTGAAGGAGCTACGCGATGAGCTTTGA
PROTEIN sequence
Length: 182
MEGIQREDPEALSLLYDRYNGILKALILRVVHNEAEADDLLQEIFMEIWNQAKNFSAQRGKPLGWMVTLARRRAIDGLRKKQAYVRAEERLQQETEQQPDAWVHNSTEQEILDGDRGVLIRRVIGVLPPAQQQAIELSFFRGMSQREIAAKTNTPLGTVKTRLELGLKKIYDGLKELRDEL*