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13_2_20cm_scaffold_420_3

Organism: 13_2_20CM_Acidobacteria_57_17

partial RP 32 / 55 MC: 1 BSCG 33 / 51 ASCG 10 / 38
Location: comp(2097..2651)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8Q1_ACIC5 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 173.0
  • Bit_score: 181
  • Evalue 7.40e-43
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 173.0
  • Bit_score: 191
  • Evalue 1.00e-45
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 173.0
  • Bit_score: 182
  • Evalue 9.40e-44

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 555
GTGATTCATCTGCGGATTCCGCCGCTGCGCGATCGCCGGGAAGACGTGCCGTTGCTTCTGGCGCATTTTATGGAACGGTATTGCCACGAAAACGGCAAACCGCTTCGGCATTTTACGCCCGCGGCAATGAAGCTTCTGATGGATTACGACTGGCCGGGCAATGTGCGCGAACTGGAAAACGTCGTCGAGCGAGCGGTCGTCCTTTCCACGCAGGAGCGTGTTGACGTGGACTTGCTCCCCGAAAGCATTCGGAGCAAGGAAATCGTTCGCGGCGTGAGGCTGCAACTCTCGGAATTCCTGCCGCCGCTCCCGGGCGAACCAGGGTCCCGCGCTTCCCCGGACAATCCGCAGCCGTCTCTGTTCCAAATCATGGACGAGATCGAACGCCGCATTATTATTGACATGCTGGAGCGCACCAGCTGGAACCAGACCGAGGCCGCTGAGCGCTTTATGATTCCCCTGTCCACGCTCAATCAGAAGATTAAGCGGCTCGGAATCGACGTCCGCCGCCGCGGCCGCGGTGACGAGATGTTGTCTGCCTCGGTGGGAAAATAG
PROTEIN sequence
Length: 185
VIHLRIPPLRDRREDVPLLLAHFMERYCHENGKPLRHFTPAAMKLLMDYDWPGNVRELENVVERAVVLSTQERVDVDLLPESIRSKEIVRGVRLQLSEFLPPLPGEPGSRASPDNPQPSLFQIMDEIERRIIIDMLERTSWNQTEAAERFMIPLSTLNQKIKRLGIDVRRRGRGDEMLSASVGK*