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13_2_20cm_scaffold_991_7

Organism: 13_2_20CM_Acidobacteria_57_17

partial RP 32 / 55 MC: 1 BSCG 33 / 51 ASCG 10 / 38
Location: comp(5800..7278)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Herbaspirillum lusitanum RepID=UPI000363946C similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 472.0
  • Bit_score: 460
  • Evalue 1.70e-126
  • rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJL92303.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 474.0
  • Bit_score: 450
  • Evalue 2.50e-123
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 489.0
  • Bit_score: 446
  • Evalue 1.20e-122

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
ATGATGCACACCAGGCAATTCCCCGCCCTGATCGGGCTCGCTCTTGCTGTCCTCATTGGTGGTTGCACGGTGGGGCCGAAGTACCAGCGTGCCACGGCGACCGTGCCTGCAAAATGGGACGTGTCGGAGCCTTGGCGCGAAAGCGCCCCAAAAGATGGTGTTGCCAAAGGCGAATGGTGGAACGTTTTCGGCGATGACGAATTAAGTGCGCTGGAAAAACAGGCGCTCGATGCGAACCAAACCATCAAAGTTTCTGCGGCACGCCTGGAACAAGCCCGCGCGTCCGCTGGAATTCAGATTGCCACGCAATTCCCCACCGTGGCGACGGCCCCGGGTGTCCAGCGCCAGCGCCTTTCCGGCAATCGTCCAACGAGCAGCAACTTTCCCACGACTGGTCCGGTCTCGCAAACAAACATTTCTTTGCCATTCACTGTCGGCTACGAAGTGGATCTGTTTGGCAGGAGGCGGCGCAGTATTGAAGCGGCGCAGGCGTCCTACCAGGCAACCGCTGCTGACCTCGAAAACGTTCGGTTGATAATCACTGCGGAACTCGCGGGCGATTATTTCACGCTGCGGCAGCTCGATGCGGAACTGGGAATTCTGCATCGCACTGTGGAAACGCTGGAGCGCGGCTTGCAATTGGTGGATCAGCGGCACAAAGGCGGCGTGGCTTCCGGGCTGGACGTCGCGCAGGAAGAGACGCTGCTGAACACCACGCGGACTCAGGCGATCCTGCTTTTGCAGCAAAGGAAACAGTTTGAAGACGCCATCGCGGTCCTGGTTGGGAAACCCGCCCCAGACTTTCATCTGTCCAGCAAGGAACTGAATGCGGAGCCACCCGGACTCAATGCGGGTTTGCCTTCGGATTTGCTGGAGCGAAGGCCGGACATCGCGGAAGCTGAGCGGCAGATGGCCGTGGCGAACGCGCAAATCGGAATTGCCCGTGCGGCTTACTATCCGTCGCTAAATCTTTTTGGAAACGGCGGGTGGCAGGCCGCGGATATCGCCAAGCTGATGAACGTGCAGAGCACGTTCTGGGCCTTCGGCGCCAACGTCGCGGAAAGCATTTTCACGGGCGGATCGCGGCGCGCGCAAGTGCAGTTCGCCAAAGCCGGCTATGACGGGAGCGTGGCGGCCTACCGCGATAGTGTTTTGAACGCCTTCCGCGAAGTGCAGGACGACGTAACCGGTTTGACCGTGCTGGACCAAGCGAACCAGTCGCAGCAGCAAGCGGTTGACGCCGCGCGCCGCACGCTGGACATCGCGAACAGCCGCTATGTCGGCGGCCTCGTGAATTATCTCGATGTCGTCAACGCGCAGCAGAATTTACTGAACAATGAGCAACAGCTTGCCGTGATTCACGGGCAGCGGCTGGTGACGAGCGTGCTCCTTATCAAGGCGCTGGGTGGCGGCTGGGATGCTTCAAGCCTCTCAGCGGTTCAAGTGAAATCAAAGCTGAAAGACGTTCTGGCGCCGTAA
PROTEIN sequence
Length: 493
MMHTRQFPALIGLALAVLIGGCTVGPKYQRATATVPAKWDVSEPWRESAPKDGVAKGEWWNVFGDDELSALEKQALDANQTIKVSAARLEQARASAGIQIATQFPTVATAPGVQRQRLSGNRPTSSNFPTTGPVSQTNISLPFTVGYEVDLFGRRRRSIEAAQASYQATAADLENVRLIITAELAGDYFTLRQLDAELGILHRTVETLERGLQLVDQRHKGGVASGLDVAQEETLLNTTRTQAILLLQQRKQFEDAIAVLVGKPAPDFHLSSKELNAEPPGLNAGLPSDLLERRPDIAEAERQMAVANAQIGIARAAYYPSLNLFGNGGWQAADIAKLMNVQSTFWAFGANVAESIFTGGSRRAQVQFAKAGYDGSVAAYRDSVLNAFREVQDDVTGLTVLDQANQSQQQAVDAARRTLDIANSRYVGGLVNYLDVVNAQQNLLNNEQQLAVIHGQRLVTSVLLIKALGGGWDASSLSAVQVKSKLKDVLAP*