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13_2_20cm_scaffold_1737_12

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(12943..13569)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 167.0
  • Bit_score: 190
  • Evalue 1.40e-45
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 171.0
  • Bit_score: 247
  • Evalue 2.30e-62
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 167.0
  • Bit_score: 190
  • Evalue 3.90e-46

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 627
GTGCTACAACCTTTTACCTCCAGCCCCTATCAGAACGGGCACATGGAGCTCACCACTCCCGGGGTGGCGACACTGAGCAGAGATCCGGACGAGCCGGCGCGGGGCGCGGGGGACGCGGAAACGGCCGACGTAGCGCTCGCCGCCAGTGGAGACGGGCGCGCGTTCGAGCGGCTGTACCGCGCCCACGTCGCCCGGGTCCACAGCCTCGCCCGACGGATGATCGGGTTCGATGTGGCGGACGACGTCACACAGGATGTGTTCGTCCGGGCGTGGACCAAGCTCGGCACGTTCCGGGGCGAGGCGGCGTTCGGCACGTGGCTGCACCGCCTGGCGATCAACGTGATCCTGGCGCGCCGCACGTCGCTCGGCACCGAGCGCGGTCGCTACCACGACGGTGCAGACGTGCTGGATGCGGTGCCGAGTCGTCCCGTCGTGAACGACTTGTCGCTGGACTTCCAGGAGGCGATCGGGCGGCTCCCCGACGGCGCGCGCGAGGTGTTCGTACTGCACGACCTGGAAGGCTACAAGCACGAGGAGATCGCGAGCATGCTGGGGATCGTGCCCGGGACGTCGAAATCGCAGCTGCATCACGCGCGCATGACGCTGCGAAAGCATCTGGACAGATGA
PROTEIN sequence
Length: 209
VLQPFTSSPYQNGHMELTTPGVATLSRDPDEPARGAGDAETADVALAASGDGRAFERLYRAHVARVHSLARRMIGFDVADDVTQDVFVRAWTKLGTFRGEAAFGTWLHRLAINVILARRTSLGTERGRYHDGADVLDAVPSRPVVNDLSLDFQEAIGRLPDGAREVFVLHDLEGYKHEEIASMLGIVPGTSKSQLHHARMTLRKHLDR*