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13_2_20cm_scaffold_1721_6

Organism: 13_2_20CM_Acidobacteria_58_27

near complete RP 48 / 55 BSCG 47 / 51 ASCG 14 / 38 MC: 1
Location: comp(7779..9692)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036AD765 similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 190.0
  • Bit_score: 170
  • Evalue 4.50e-39
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 218.0
  • Bit_score: 178
  • Evalue 3.00e-41
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 195.0
  • Bit_score: 167
  • Evalue 1.40e-38

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Taxonomy

R_Acidobacteria_60_20 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1914
ATGTACACTCGGTCATTGTCGATCGGTGCTAGCCGACGGCGGGCAATGAGCTTTCTCAGAGCAGTTCGGTTAGACGACAAATTCGACCCCTTTTTCGAGTTTCAAGAGACCCTTGGATTTGTTCCCAAGCTGTTCTACGCGCAGACCCTACTGCCCCGCGTAATCGAGGCCCAGGCGCGCATTGCGGCCACGGTTCTCCTCAAGGACAAAGCGCTTTCCAGAATACAGAAGGAACAGATCATCCTGATGGTCGCAGCCGCCCGGCAAGACACGTATTGCGTTACCGCGCATCGCAAGATTTTGTCTTCCCTTGGCAAGTCGGAGGCCCAACTCGATCGGCTCTTGACCGACTACCGTCGTGCTGGCTTCTCGGAAGTCGACGTAGCTCTATTAGACTTCTCTGCCAAATTGAGTCAGCACGCGTCTTCTGTGCATTCGGGGGATATCGAAACGCTACGCGGGTGTGGTCTCGACGACGAGTCGATCCTGGAGGCTGTCCAGGTAACGGCTCTGGCCTGTTTCCTTTGTACGCTCTCCGCAGGCCTGGCCCCAGAGCCGGACTTTGAGCCCCGGAAGCTTTCTTCACCCACGATCAGTCCGCCGCGCGAGCCAGGGTCTCCGGGTACAGTCGCGCAGGGCCCGCACGCCCCTGGTAAAAAGGGGCCGTACTTGCGCGCTGTATATCAAAGCCCGAAGACTTTTGGGCCTTTCAGATTTTTTCAGAAGAACCTTGGCTTCATACCGAACATCTTTCGCGCTCAGACTTTGCGGCCCGACGTGCTTGAGGCGGAGGCGGAAGCCGTCGGCAAGATCCTGCTAACCGAAGATGTTCTCACCCGAGTGCAGAAGGAAAGCATTCTCCTGGTGATCTCGGCAGCAAACCTGAACTCATATTGCGTAGCGGTGCATTGCAACATGCTTCGGGGTTTGGGCATACCCTCGGAGGAAAGCGACCAGATAGCGGTGGACCACCACCAGTCCAACCTCACTGAAGCCGATAGAGCATTGCTAGACTTCACTCTCAAACTTGGGGTACGTCCTCTGGAGCTTTGTCGTGAGGACGTAGATCGGCTCCGAGGACATGGTTTCACAGAGGAGCAGGTTCTGGAATCTGAAGTGATGACGGCTCTTACGAATTTCCTCAACACCCTCCAAATGGGGCTGGGGGTCGAGCCAGATTTTGAGCCCCCCTTCGTCCTGGAACAAAATAAAGTGCATCTTCCTGCGGCTGCTAACGCTCCCGTGGAGCGCGGCTTCGTCGCCCCCACGCTCACAACTGTGCACGATCCGGACGCTGGATTGGTAGCCCAAGCGCAGGGTGGGAAGCTGGAGGCTTTCGAAGAATTGGTTCGCCGCCACAGCCAGTTGATTTATCGGGCCCTGGTGGCAATTCTCGGCGACCCGGTCGAGGCGCAGGATGGTATGCAGGATGCTCTATTGAGCGCATTCAAGCGCATTGCGGGATTCCAGGGCCGCTCGAAGTTTTCTACTTGGCTGGTCAGTATCGCCAGGAATACGGCATTCCAACGTTTGCGGGGCCGGAGAGAAGTTGAGAGCTTGGATGAAGGAGAGTGTGAGGAAGATCACGACTTTCGGCCTCGACAGGTGAGAGCTTGGCAGGATAATCCCGAGCAGTGCTGCTCTAAATCAGAAATTCGGCAGCTCGTTGAAAAGGGGATTTCGGGTCTTCCCCCTAAGTATCGCGTTGTGGTGATGCTCCGGGATGTCGAGCAGCTTTCGACGGATGAAGTGGCCCGTCAACTGGGGCTGAGCGTCCCTGCGGTAAAGGTGCGGCTCCTGCGGGGCCGACTCATGCTGCGAGAATGGCTCTCGCCGCATTTCGCGACGAGCGTCAAGAGAGCAACCCCACGATCACGTGCGAGGATTTCTTCGTTGAGTTCGGGGACTACCTAG
PROTEIN sequence
Length: 638
MYTRSLSIGASRRRAMSFLRAVRLDDKFDPFFEFQETLGFVPKLFYAQTLLPRVIEAQARIAATVLLKDKALSRIQKEQIILMVAAARQDTYCVTAHRKILSSLGKSEAQLDRLLTDYRRAGFSEVDVALLDFSAKLSQHASSVHSGDIETLRGCGLDDESILEAVQVTALACFLCTLSAGLAPEPDFEPRKLSSPTISPPREPGSPGTVAQGPHAPGKKGPYLRAVYQSPKTFGPFRFFQKNLGFIPNIFRAQTLRPDVLEAEAEAVGKILLTEDVLTRVQKESILLVISAANLNSYCVAVHCNMLRGLGIPSEESDQIAVDHHQSNLTEADRALLDFTLKLGVRPLELCREDVDRLRGHGFTEEQVLESEVMTALTNFLNTLQMGLGVEPDFEPPFVLEQNKVHLPAAANAPVERGFVAPTLTTVHDPDAGLVAQAQGGKLEAFEELVRRHSQLIYRALVAILGDPVEAQDGMQDALLSAFKRIAGFQGRSKFSTWLVSIARNTAFQRLRGRREVESLDEGECEEDHDFRPRQVRAWQDNPEQCCSKSEIRQLVEKGISGLPPKYRVVVMLRDVEQLSTDEVARQLGLSVPAVKVRLLRGRLMLREWLSPHFATSVKRATPRSRARISSLSSGTT*