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13_2_20cm_scaffold_47_17

Organism: 13_2_20CM_Acidobacteria_58_27

near complete RP 48 / 55 BSCG 47 / 51 ASCG 14 / 38 MC: 1
Location: 16219..17451

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KIL39894.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.; similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 403.0
  • Bit_score: 469
  • Evalue 4.30e-129
Putative RNA polymerase, sigma-24 subunit, ECF subfamily id=4216382 bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 399.0
  • Bit_score: 450
  • Evalue 1.90e-123
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 401.0
  • Bit_score: 442
  • Evalue 1.50e-121

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Taxonomy

Paenibacillus sp. VKM B-2647 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1233
GTGAATGGAAGCAATCAAGAATATACGCACCGGACCATCGAGCGTGTGGCCCGGGAATCCTACGGCCGGCTGGTGGCCTATCTTTCCGTGCACACGCACGACTTGGCCAGCGCAGAGGACGCTCTCAGCAACGCACTAGTGTCGGCGCTCAACCATTGGCCGCAGGATGGGGTGCCTAAAAATCCGGAGGCGTGGTTGCTGACAGCGGCGCGCCATTCGCTCATTGATGTGATTCGTCACCAGAAGGTGGTATTGGAGAGCGAGCCAACGCTTAAGTTCCTCACAGAGAACTCCACGGAGACTACCTTGTCCACCCAATTTCCTGATGAACGCCTCAAACTGCTTTTCGTCTGCGCTCACCCGGCGATCGACCCCGCGATGCACACACCGCTCATGCTGCAAACGGTCTTGGGTCTGGATGCAGCACGTATTGCCCAGGCCTTTCTCATCGCACCGAAAACCATGGGGCAACGCCTTTTTCGCGCGAAGACAAAAATCCGCAGTGGTGGCATTCCGTTCGAAATCCCGCCAGAGCGTGATCTGCCGGAGCGCCTTGACGCCGTGCTCGAAGCGATCTACGCCGCTTTCGGGCTCGGCTGGGACGACATGGCGGGGGCCGACCAGCGCGGGCGCGATCTGGCCGAGGAAGCGATGTGGCTCGCGCGCGTGCTTCTGCAGTTGATGCCCGGCGAAGCCGAAGTTCAAGGCCTGCTGGCCCTCATGCTGTATTGTGAAGCGCGCCGCGCTGCGCGAAGGGACGCCAAGGGACGCTACGTTCCCCTGTCCGAGCAAAACCCGAACCAATGGTCGCTTCCTTTAATAGAGGAGGCGGAACACCATTTGGCGGAGGCTTTCAAGCATGGCCGCGTCGGACGATTTCAAGTTGAAGCTGCCATCCAATCCGTGCATGCGGAGCGCGCGCGCACCGGTCGGACCGACTGGACAGCAATCGTGCTGTTCTACGAACAACTGCTCAGGATATCGCCGGCGCTCGGCACACGAGCCGGATACGCCGCCGCGCTTGCGGAAGCAAACGGACCGGCAGCAGGACTCGCCGTTCTCGAATCGATTGACACGGAGGCCGTGTCCCATTATCAGCCGTACTGGGCGGTTCGCGCTCACCTCCTGCAGCGCCTCGGGAAGACTCGTGAGGCCACAGACGCCTACGACCGCGCCATCGGCCTGGCCGAAGATCCCGCCGTGAGAGAGTTCCTGCTTCACAAGCGCGGCTAA
PROTEIN sequence
Length: 411
VNGSNQEYTHRTIERVARESYGRLVAYLSVHTHDLASAEDALSNALVSALNHWPQDGVPKNPEAWLLTAARHSLIDVIRHQKVVLESEPTLKFLTENSTETTLSTQFPDERLKLLFVCAHPAIDPAMHTPLMLQTVLGLDAARIAQAFLIAPKTMGQRLFRAKTKIRSGGIPFEIPPERDLPERLDAVLEAIYAAFGLGWDDMAGADQRGRDLAEEAMWLARVLLQLMPGEAEVQGLLALMLYCEARRAARRDAKGRYVPLSEQNPNQWSLPLIEEAEHHLAEAFKHGRVGRFQVEAAIQSVHAERARTGRTDWTAIVLFYEQLLRISPALGTRAGYAAALAEANGPAAGLAVLESIDTEAVSHYQPYWAVRAHLLQRLGKTREATDAYDRAIGLAEDPAVREFLLHKRG*