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13_2_20cm_scaffold_5412_8

Organism: 13_2_20CM_Acidobacteria_57_7

partial RP 28 / 55 BSCG 26 / 51 MC: 1 ASCG 7 / 38
Location: comp(4670..5287)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YV2_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 213.0
  • Bit_score: 191
  • Evalue 8.00e-46
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 213.0
  • Bit_score: 191
  • Evalue 2.30e-46
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 213.0
  • Bit_score: 191
  • Evalue 1.10e-45

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Taxonomy

Candidatus Solibacter usitatus → Candidatus Solibacter → Solibacterales → Solibacteres → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGCCTCCGGCAGTAGCGGCCGCCCAGGGGCATGGGTCGAAGGCTGGCGCCGCGGCGCATGACCGCGAACTGGTTCGCCGTGCGCAACGAGAAGACAAGGAGGCGTTCGAGGAGCTTGTCCGGCGCCATCAGCACCGTGTCTTTGCCGTTGCCGGCGGGATTTTGCGAAGGCGCGAGGACGTGGAAGATATCGCGCAGCAGGTTTTTGTTAAGGCGTATTTTTCGCTGAAGCGGTTTGATCAGCGAGCCGCATTCAGCACCTGGCTGTACAAGATCACCGTGAATGAATGCTGGGACTTGCTCAGAAAAAAGAAAGTGCGGCCCCTGGTATACGAGTCCGACTTGAGCGAGGAGCAGGCCAGGCAAGTCATCACGGCCGGGGATAAAGAGAATCCGGGGCCGGATGCCATCGAGAAGATGGAAGCGCGAGAGCGCGTGGAGCAGCTGCTGGAGGGGTTGGATGAGAGAGACCGGCTGATGCTGATCCTGAAGGAAGTGGATGGATTTTCGATCGAGGAGATTGCGGAAGTTTTGAATCTGAATGGCAACACGGTGAAAGTGAGGCTCTTTCGTGCACGGCGACGCGTGGTTAGCCGGGCGAAGAAGCGCGTAGATTGA
PROTEIN sequence
Length: 206
MPPAVAAAQGHGSKAGAAAHDRELVRRAQREDKEAFEELVRRHQHRVFAVAGGILRRREDVEDIAQQVFVKAYFSLKRFDQRAAFSTWLYKITVNECWDLLRKKKVRPLVYESDLSEEQARQVITAGDKENPGPDAIEKMEARERVEQLLEGLDERDRLMLILKEVDGFSIEEIAEVLNLNGNTVKVRLFRARRRVVSRAKKRVD*