ggKbase home page

13_2_20cm_scaffold_129_12

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 8161..10617

Top 3 Functional Annotations

Value Algorithm Source
formate dehydrogenase major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=24540626 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 824.0
  • Bit_score: 1461
  • Evalue 0.0
  • rbh
formate dehydrogenase major subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 835.0
  • Bit_score: 1386
  • Evalue 0.0
formate dehydrogenase major subunit similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 856.0
  • Bit_score: 801
  • Evalue 1.90e-229

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2457
ATGACGACGAACCTGATCGACATCCAGAACTCGGATGTCATCATGGCGACCTCCAACATGGCCGAAAACCACCCGGTGGGCTTCCAGTGGGTGATGAAGGCCAAGGAGCGCGGCGCGAAGTTCATCCACGTCGACCCGCGCTTCACGCGGACCAGCGCCGCCGCCGACATCCACGTGCCGCTCAGGAGCGGCACCAACATCGTCTTCTTCGGCGGCCTGATCAACTACGCGATCCAGAACAACCTGTACTTCAAGGACTACGTCGTCCACTACACGAACGCCTCGTTCCTGATCGACCCGGCGTTCAAGACGGCGACCGACCTCGACGGTCTCTTCACCGGCTTCGACCCCGCCAAGCGGACCTACGACAAGTCGAGCTGGAAGTACCAGGTCGACGGTGAGGGCAACCCCCAGCGGGACCCGACGCTCAGGAACCCCCACACCGTCTTCCAGCTGATGAAGCGCCACTACAGCCGCTACTCCGTCGAGATGGTGGAGCGGGTGTGCGGGATCCCGAAGGCGAAGTTCGAGGAAGTGGCCAAGCTCTACTGCGGCAACTCCGGGCCCGAGAAGACCGGGACCATCACGTACGCGCTGAACCTGACCCAGCACACCAACGGCGTCGAGAACATCCGCTCGCTGTGCATGCTGCAGATCCTGCTCGGCAACATCGGCCGGCCCGGTGGCGGCGTCACGGTCCTCCGCGGCCATGCCAACGTGCAGGGCGCCACCGACCTCGAGCTGCTCTACCACGAGCTGCCCGGGTACCTGGCCCAGCCGCTGCGTGACGCGCATCCCGATCTCAAGACCTACCTCGAAAAAGAGACGCCGAAGGGCGGGTACTGGACCAACAAGCCGAAGTTCATGGTGAGCCTGCTCAAGGCGTTCTATGGGGACGCGGCCACCAAGGAAAATGACTTCGGCTACGACTGGCTGCCCAAGCGCGCGTCGGCCGACGCCTATAGCCACCAGCACATGTTCGTGGACATGTACAACGGGATTATCAAGGGCTTCCTGGCCCTCGGCCAGAATCCCGCGGTCGGCGGCCCGAACGCCAAGCTGGCCCGCGACGCGATGACGCGCCTGGACTGGCTGGTGGTGAAGGACATCTTCATCACCGAGACGGCCGAGGTTTGGAAGGCGCCCGGCACGAATCCGAAGGACGTGAAGACCGAGGTGTTCTTCATGCCGGCCGCGCCGGCCGCCGAGAAGGACGGCTCGCTCACCAACACGATGCGGCTGATCCAGTGGCACGAGAAGGCGGTGACCCCGCCGGGCGACGTGACCTCGGATGCGGAATTCGTCACCAATCTCGGCAAGCGCCTGCAGAAGCTCTACGCCGGATCGAGCAAGTCGCGCGACAAGGGCTTCCTCGCCGCGAACTTCCAGTTCGGCAGCGATCCCAAAGAGCCGGACATGCTGGAAGTCCTGAAGGAGATCAACGGCGTCGCCACCGAGGACATCACCGACAAGGACGGGAAGGTCGTCTACAAGAAGGGCCAGCCGATCGCGACGTTCGGCCACCTGACCGACGACGGCAAGACGACATCGGGGTGCTGGATCTACACGGGCGTCACCGTCGAGGGGCCGGATGGCAAGGTCATCAACAAGGCCAATGCGCGCAAGCCCGCCGACGCCAAGGACTACCTCGGCCACGGCTGGGCGTTCGCGTGGCCGGCCAACCGGCGCATCCTCTATAATCGCGCCTCCGCCGACCTCAAGGGCCGGCCGTGGAGCGAGAAGAAGAAGCTGATCTGGTGGGACCCCGAGGCTCCCGGGCAGAAGCCCGAAGAGAAGGGGAAGTGGGTCGGCATGGACGTGCCCGACTTCAACCCGTTCCTGGCACCCGACGCGAAGAACGGTGACAAGCCGTTCATCATGCGCGCCGATCTCGTCGGCGCGTTCTTCGGGCCGCTCAACGACGGCCCGTTCCCCGAGCACTACGAGCCGATCGAGTCGCCGGTGAAGAACCTCCTCTCAAAGACACAGAACAACCCGGTGGCGAAGATCTGGAAGGTGCCCGATCAGAAGAACGAGCTGGCGCCGGTCGGGTCACCCGATTATCCGTATGTCATCACGACGTACCGCCTGACCGAGCATCACCTGTCCGGCGTCATGTCCCGCTACCTGCCGTACCTGGCCGAGATGTTCGAGTCGCACTTCGCCGAGATCAGCCACGAGCTGGCCGGCGAGCTCGGGATCCAGAACGGCGACAAGATCACGGTGTCGTCGCCGCGCGGCAAGATCCACGTGAAGGCCATGGTCACGAGTCGGTTCAAGCCGTTCATCGTCGACGGCAAGACGATCCACCAGATCGGCGTGCCCTGGCACTGGGGCTACAACGGCATTTCCAAGGGCGACATCACCAACGACCTGTCCGCGACGGTCGGCGACCCCAACGTCTACATCCAGGAGACGAAAGCCTTCGTCTGCAACGTGAAGAAGGGGGTGGTGTAG
PROTEIN sequence
Length: 819
MTTNLIDIQNSDVIMATSNMAENHPVGFQWVMKAKERGAKFIHVDPRFTRTSAAADIHVPLRSGTNIVFFGGLINYAIQNNLYFKDYVVHYTNASFLIDPAFKTATDLDGLFTGFDPAKRTYDKSSWKYQVDGEGNPQRDPTLRNPHTVFQLMKRHYSRYSVEMVERVCGIPKAKFEEVAKLYCGNSGPEKTGTITYALNLTQHTNGVENIRSLCMLQILLGNIGRPGGGVTVLRGHANVQGATDLELLYHELPGYLAQPLRDAHPDLKTYLEKETPKGGYWTNKPKFMVSLLKAFYGDAATKENDFGYDWLPKRASADAYSHQHMFVDMYNGIIKGFLALGQNPAVGGPNAKLARDAMTRLDWLVVKDIFITETAEVWKAPGTNPKDVKTEVFFMPAAPAAEKDGSLTNTMRLIQWHEKAVTPPGDVTSDAEFVTNLGKRLQKLYAGSSKSRDKGFLAANFQFGSDPKEPDMLEVLKEINGVATEDITDKDGKVVYKKGQPIATFGHLTDDGKTTSGCWIYTGVTVEGPDGKVINKANARKPADAKDYLGHGWAFAWPANRRILYNRASADLKGRPWSEKKKLIWWDPEAPGQKPEEKGKWVGMDVPDFNPFLAPDAKNGDKPFIMRADLVGAFFGPLNDGPFPEHYEPIESPVKNLLSKTQNNPVAKIWKVPDQKNELAPVGSPDYPYVITTYRLTEHHLSGVMSRYLPYLAEMFESHFAEISHELAGELGIQNGDKITVSSPRGKIHVKAMVTSRFKPFIVDGKTIHQIGVPWHWGYNGISKGDITNDLSATVGDPNVYIQETKAFVCNVKKGVV*