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13_2_20cm_scaffold_1470_12

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: comp(11845..12552)

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TFX5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 250.0
  • Bit_score: 273
  • Evalue 2.40e-70
TPR repeat {ECO:0000313|EMBL:CCE05363.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 250.0
  • Bit_score: 273
  • Evalue 3.40e-70
conserved protein of unknown function, TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 246.0
  • Bit_score: 253
  • Evalue 7.20e-65

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ACGGACTTCATGGTGTACGCGCACCTGCAGCTCGGTCAGGACGTGCGAGCCAAGGCGCTCGTCGATGCGATCGCCGCGCTGCCCCGGCCGGACTCTGCCAGCGTCCCCGGCGTCACCGCCATCACGGCAATCCCCGCGCGCTACGTGCTCGAGCGCGGCGACTGGGCCGGCGCTGCCGGGCTGCGGATGACCCCGACGGGGCGACCTCAGGGCGATTCGCTGACTCGATTCACGCGCGGGCTGGGCATGGCGCGGAGCGGCGATCTTGCGGGAGCGAAGGGCGAGGTCCAGGCGATGCAGGCGCTCCGCGGCGCGCTCGCGACGTCGAATCAGTCCTACTGGGCCGAACGCACCGACGAGCAGATGCTCGCGGTCTCCGCGTGGGTGGCCCTGGCCGAAGGCGCGACCGACCAGGCGGTGAAGCTCATGCGCGCGGCCGCCGACGGCGAGGATGGCAGCGTGAAGCACGTCGCGATGGAGAATCGCCTCTATCCGATGCGCGAGCTGCTCGGTGAGTTGCTGCTCCAGATGGGACAGGCCGCGCCCGCGCTGCGCGAGTTCGAGGCCTCGCTCAGAGAGAACCCGAACCGCTATCGCGGGCTCTACGGGGCGGCGCGTGCGGCGGAAGTGGCGGGTGATCGGCCGAAGGCGACGGAGTACTTCGAGAACGAGATCGTCCACGCGAAGGCGTTCCTCGGACAGCGGTGA
PROTEIN sequence
Length: 236
TDFMVYAHLQLGQDVRAKALVDAIAALPRPDSASVPGVTAITAIPARYVLERGDWAGAAGLRMTPTGRPQGDSLTRFTRGLGMARSGDLAGAKGEVQAMQALRGALATSNQSYWAERTDEQMLAVSAWVALAEGATDQAVKLMRAAADGEDGSVKHVAMENRLYPMRELLGELLLQMGQAAPALREFEASLRENPNRYRGLYGAARAAEVAGDRPKATEYFENEIVHAKAFLGQR*