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13_2_20cm_scaffold_23066_4

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 2561..3757

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 399.0
  • Bit_score: 618
  • Evalue 7.20e-174
Extracellular ligand-binding receptor id=4383513 bin=GWF2_Methylomirabilis_70_14 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 402.0
  • Bit_score: 589
  • Evalue 3.30e-165
putative branched-chain amino acid ABC transporter substrate binding protein similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 390.0
  • Bit_score: 441
  • Evalue 2.40e-121

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGAGGAATTCCATCACTCGCTCGGTCGTTGGTGTCCTCGTCGTTCTCGCGCTCGCCGCGGTGCCGGCCGGCGCGCCCATTGCCCAGGGCAAAGGGACGATCAAGATCGCGTCTCAGAGCCCGCTCAGCGGCGGCCAGGCCGCGCTCGGTGAAGGGATCAAGCTCGGCGCCCAACTCGCCGTCGAGAAGTTCAAGGGCCCGCTCGAGAAGATGGGCTTCAAGGTCGAGTTCGTGCCGTACGACGACCAGGCCAAGCCCGACGTCGGCGTCTCCAACAGCAAGAACATCATCGCCGACAAGGACATCCTCGCGATCATCGGGCATCTGAACTCGGGCGTGGCCATTCCGTCGTCCGAGGTCTACAAAGAAGTCAGCCTGGCCATGATCTCGCCGGCCAACACCAATCCCACCGTGACCGACCGCAAGTACACCAATGTCAACCGCGTGTGCGGACGCGACGACGTCCAGGGCGTGGTCGGCTCGGAGTTCGCGAAGAGCCTCAACGCGAAGACCGTCTACGTGATCCACGACAAGACGCCGTACGGCCAGGGTGTCGCCGAGTTCTTCCGCGACGACGCCAAGAAGAAGGGCCTCAACGTGCTCGGCTTCGAGGGCACCGAGGAGAAGTCGAACTTCGACCCGATCATCACCCCCATCCGGGCGCGCAATCCCGACCTCATCTACTTCGGCGGGATCTACGACCAGGGCGCGCCGTTCTTCAAGCAGGCGCGCGAGAAGGGCGTGAAGTCGAAGTTCATGGGGCCGGACGGCATGGATTCGTCCGACCTGGCCAAGATCGCGGGCAAGAACGTCGTCGGGATGTACTACACGTCGGCGGCGGGCCCGGCCTCGGCGTTGCCCAAGGCGAAGCAGTTCGTGGAGGACTTCAAGAAGAAGTTCGGCAAGAACCCCGAGCCCTACGCTGCCGAGGCCTACGATGCCGCGACGGTCGCCCTCAAGGCCATCGAAGCGGCGGCCAAGGGCGGCAAGGCGCCCAGCCGTGAGGACGTGGCGGTCGCCGTTCGCAAGGTGAAGCTGTCCGGCATCACCGGCGACATCGAGTTCGACGCCAAGGGCGATCGGAAGAAGGCGCTGTACTTCGTGCTCCAGGTCGACAGCGACGATCCGCAGAAGTGGGGCGACAACAAGATCGTGAAGCAGCTCGCGATCGCGCCCCCCAGCGCCTCGAAGAACTAG
PROTEIN sequence
Length: 399
MRNSITRSVVGVLVVLALAAVPAGAPIAQGKGTIKIASQSPLSGGQAALGEGIKLGAQLAVEKFKGPLEKMGFKVEFVPYDDQAKPDVGVSNSKNIIADKDILAIIGHLNSGVAIPSSEVYKEVSLAMISPANTNPTVTDRKYTNVNRVCGRDDVQGVVGSEFAKSLNAKTVYVIHDKTPYGQGVAEFFRDDAKKKGLNVLGFEGTEEKSNFDPIITPIRARNPDLIYFGGIYDQGAPFFKQAREKGVKSKFMGPDGMDSSDLAKIAGKNVVGMYYTSAAGPASALPKAKQFVEDFKKKFGKNPEPYAAEAYDAATVALKAIEAAAKGGKAPSREDVAVAVRKVKLSGITGDIEFDAKGDRKKALYFVLQVDSDDPQKWGDNKIVKQLAIAPPSASKN*