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13_2_20cm_scaffold_3520_10

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: comp(8125..8841)

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JHJ5_ANAD2 similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 171.0
  • Bit_score: 141
  • Evalue 1.40e-30
ABC transporter permease; K05846 osmoprotectant transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 160.0
  • Bit_score: 183
  • Evalue 2.70e-43
glycine betaine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 171.0
  • Bit_score: 141
  • Evalue 4.10e-31

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGACGCCACGCCGCGCTGGCGCCTTCATCATCGGGCTCACCGTGGTCGGCATCGCGCTCGCCATGTTCGGCCGGGCCGCCGCGCCGGCGCCGCCGGTCCGCGTCGGGTCGAAGTCGTTCACCGAGAGCTACGTCGTTGCCGAGATCGTGGCCCGGGTGATCGAGGAGGTGGCTGAGGCGTCGGTCGAGCGGCGCTTCGGCCTGGGCGGAACCGGTATCGCCTTCGGCGCGCTGGCGAGCGGCGAGATCGACGTTTACCCGGAGTACACGGGGACCATCAGCCGCGCCATCCTGAAGGACGCGTCGGTGACCACGATAGACGCGCTGCGCTCGCGGCTCCGGCCGCTCGGCCTGACGATCAGCGACCCGCTGGGCTTCGCCAACACGTACGCGCTGGCCGTCGCCCGCGCCACCGCCACGCGGCTCAGGCTTCGCACGATCAGCGACCTCGCGCGACACCCCGGGCTCACGGCGGCCTTCGACCCGGGCTTCATCGACCGTGACGATAGGCGGTCGCCAGTGGCCACGTCGACGTCATCGACGTGTTCTCGACCGACGGGCAGCTGGCGCGGTACGACCTCGTCGTCCTGGAGGACGACCGCCACTTCTTTCCCGAGTACGCGGCCGTCCTCCTCGCTCGCGCGTCGCTGCCCGAGCGGTTGCCGCGCACGTGGAGCGCGCTGCGAGAGCGGCTGGCGGGACGGATCGACCGCCTGA
PROTEIN sequence
Length: 239
MTPRRAGAFIIGLTVVGIALAMFGRAAAPAPPVRVGSKSFTESYVVAEIVARVIEEVAEASVERRFGLGGTGIAFGALASGEIDVYPEYTGTISRAILKDASVTTIDALRSRLRPLGLTISDPLGFANTYALAVARATATRLRLRTISDLARHPGLTAAFDPGFIDRDDRRSPVATSTSSTCSRPTGSWRGTTSSSWRTTATSFPSTRPSSSLARRCPSGCRARGARCESGWRDGSTA*