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13_1_40cm_scaffold_1002_16

Organism: 13_1_40CM_Thaumarchaeota_38_12

near complete RP 29 / 55 MC: 2 BSCG 11 / 51 ASCG 32 / 38
Location: comp(10108..10749)

Top 3 Functional Annotations

Value Algorithm Source
LmbE family protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GFA8_METPE similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 205.0
  • Bit_score: 165
  • Evalue 6.40e-38
LmbE family protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_45_13b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 205.0
  • Bit_score: 181
  • Evalue 1.20e-42
LmbE family protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 205.0
  • Bit_score: 165
  • Evalue 1.80e-38

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Taxonomy

R_RIF_OD1_12_45_13b → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGAAAAACAAAAAGAAAAGTCAAACAGCAATAGTGTTCGGTGCTCATCCAGATGATATTGAGATAGGAATGGGGGGAACGGTCGCTAAACTTGGGAAATTAGGTTATGATGTGAAATTGGTGATAGCTGCTACACCTGATCATCCAAAAGGCATGCGGGAAGTAAGAAAAACTGAATCAAGAAAGGCCGCAAAAATCATGGGTTGCGATCCTCCTGAGTTTCTTGATCTAAAGTGCAATGAATTTCTTTTTAATAGAACTCTAGTGGGTCGACTAGATAAAATAATTGCAAAACATAAACCCGAAGTAGTTTTTACTCAGTGGGTTGGGGATTCGCATCAAGATCATCAAATAATGACTAGATGTGTATTAGCAGCATCACGTAAAATAACCAATGTTCTCATGTACGAAACCACAATCCCAAGTTTAGTTACTGATGTACCTTTTGGACCTAGGCTTTATGTTGACATAACTTCCACTATTGAGACAAAGAAAAAGGCAGTATTGTGTCATCAAACTCAGGCAAAGATCTATGGTTCTCTCTGGATTAAAGCCATAGTTGCAAGAAGTGCATTCAGGGGTTTCCAAATACGTGCACCACACGCAGAGGTCTTCGAAGTAACAAAAATCACTAAATGGTAA
PROTEIN sequence
Length: 214
MKNKKKSQTAIVFGAHPDDIEIGMGGTVAKLGKLGYDVKLVIAATPDHPKGMREVRKTESRKAAKIMGCDPPEFLDLKCNEFLFNRTLVGRLDKIIAKHKPEVVFTQWVGDSHQDHQIMTRCVLAASRKITNVLMYETTIPSLVTDVPFGPRLYVDITSTIETKKKAVLCHQTQAKIYGSLWIKAIVARSAFRGFQIRAPHAEVFEVTKITKW*