ggKbase home page

13_1_40cm_scaffold_41819_4

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: 4265..4648

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein id=3708973 bin=GWA2_Methylomirabilis_73_35 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 128.0
  • Bit_score: 225
  • Evalue 2.40e-56
putative RNA-binding protein RbpA Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 127.0
  • Bit_score: 225
  • Evalue 3.30e-56
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 123.0
  • Bit_score: 116
  • Evalue 7.40e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGGCGTCCAAACTGTATATCGGCGGTCTCGCGTACTCGACGACGAGCGACGGGCTTCGCGAGTTCTTCAGCCAGTGCGGCAACGTGCTGTCAGCGACTGTGATCACCGACCGGTTCTCCGGACAGTCGCGCGGCTTCGGGTTCGTCGAGATGGCGACGGCGGAAGAGGCGCAGAACGCGATCTCTCAGCTCAACGGGCGTGAGTTCGACGGCCGGAAGATCACGGTCGAGCTCTCGAACCCCCAGGGCCAGCGCAGCGGCGGCCCGCGACCCGGCGGTAACCGGCCGGGCGGCGGTGGGCGCGGTCCGGGCGGTGGACGGGGCCCGGGCGGCGGGCGCGACAGCGGCTACGCCCACCGACCCTCCAAGCCCGTGAAGTGGTAG
PROTEIN sequence
Length: 128
MASKLYIGGLAYSTTSDGLREFFSQCGNVLSATVITDRFSGQSRGFGFVEMATAEEAQNAISQLNGREFDGRKITVELSNPQGQRSGGPRPGGNRPGGGGRGPGGGRGPGGGRDSGYAHRPSKPVKW*