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13_1_40cm_scaffold_53751_1

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: comp(332..661)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 109.0
  • Bit_score: 179
  • Evalue 3.10e-42
pseudouridine synthase id=2650586 bin=GWF2_Methylomirabilis_70_14 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 117.0
  • Bit_score: 131
  • Evalue 6.80e-28
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 113.0
  • Bit_score: 118
  • Evalue 9.90e-25

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGGCGGTGCGGCCCGCTGGCCAGGGCCGGCGCGCGGTCACACGGTACCGGGTGCTCGAGCGCCTGCGCGGCTTCACGCTCCTCGAGGTGAGCCTCGAGACGGGCCGCACGCATCAGATCCGCGTGCACCTGGCCTCACTCGGCCACCCAGTCGCCGGCGACGACGTCTACGGCGGCCGGCGCCGAGAGGCGCTCCCGACTCCGGTCGAGGGCCTGGCACTCCACGCCGCCCGCCTGGCGTTCGTCCACCCGGCGACGGGACGCACCCTCGAGTTCGCGTCACCGGCGCCGGCTCGCATCGAGCGGCTCCTGTCTCACCTGCGCAACTAA
PROTEIN sequence
Length: 110
MAVRPAGQGRRAVTRYRVLERLRGFTLLEVSLETGRTHQIRVHLASLGHPVAGDDVYGGRRREALPTPVEGLALHAARLAFVHPATGRTLEFASPAPARIERLLSHLRN*