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13_1_40cm_scaffold_6148_7

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: 4811..6730

Top 3 Functional Annotations

Value Algorithm Source
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 639.0
  • Bit_score: 1146
  • Evalue 0.0
shc; squalene-hopene cyclase (EC:5.4.99.17) similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 647.0
  • Bit_score: 704
  • Evalue 2.50e-200
Squalene-hopene cyclase id=2224621 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 544.0
  • Bit_score: 990
  • Evalue 1.00e-285

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1920
ATGTTACCATCTGGCGTCGTGACGGTCCTCGACGACGCCATCGCCCGCGCCCAGGCCTACCTCCTCGCTCACCAGGCGCCAGACGGACATTGGATCGGCGAGCTCGAGGCCGACACCACGATCACCTCCGAATACCTCTTGCTCGGTCACCTGATCGATCGGATCGACCGCCGCAAGGAGGCCAAGGCCGTCCAGTATCTCCGTCGCGAGCAGCTCCCGGACGGCGGCTGGAGCCTCTTCGCAGGCGGCCCGATAGATCTGTCCGCCACGATCAAGGCGTACTTCGCGATGAAGCTGGCCGGCGTGAGCGTCGACGACCCCGCGCTGGTCGCGGCGCGCGAGCGCATCCGCGAAATGGGCGGGCCCGTGAAGGCCAACGTCTTCACCAAGATCCAGCTGGCGCTCTTCGGTGAGTACGACTGGAACGGCGTGCCCGCGATGCCCGTCGAGATCATGCTACTGCCGCGGCCGTTCTTCCTGTTCAACATCTACGAGGTCTCGTACTGGTCGCGGACGGTGATCGTCCCGCTCCTGATCATCATGGACCGGAAGCCGGTGAAGTGGCTGCCGCCTCACCTCTCGCTGGACGAGCTCTGGCCCGAGTCGCGGGAGAAGACGAGCCTCCGCTTCCCGCGCGTGCCCGAGCCGTTCAGCTGGCGGAAGCTCTTCTGGAAGAACGTCTTCATCGCCGTGGACGACGGCCTCAAGATCTGGGAGCGCTTCACCACGCGTCCGCTCCGCAAGCGTGCGGTCGAGGCGGCGCGCGTGTGGCTCGAGGAGCGGCTCGCCGTCCCCGGCGGCCTCGGCGGCATCTACCCCGCGATGGCCAACTCGATCCTCGCGATGCGCCTGCTCGGCTACCCCGACGACCACCCGCTGGTCCTCGGCCAGCTCAAGGAGATCGAGGCGCTTGGGGTCGAGACGGACGACGCGCTCCACTACCAGCCGTGCCCGTCGCCGGTGTGGGACACCGGGCTCGCGATCAACGCGCTGATCGAGAGCGGCCTCCCGCCCGAGCACGCGGCGCTGCGCCGTGCGGCGGAGTGGCTCATCGATCGCCAGATCCTCGTCCCGGGTGACTGGCAGGTGAAGCGGCCCCACGTCCGGCCGGGCGGCTGGGCGTTCCAGTACCACAACGACTTCTACCCGGACCTCGACGACACCGCGATGGTCCTGATGGCGCTCGAGAAGGTCCGCGGGCTCGACGGGGACGCCGTGCGATTGGCGAAGGAGCGCGGGCTCGGCTGGTTCTTCGGCATGCAGGGCGAGGACGGGGGCTGGGCGTCGTTCGATGCCGACAACAACCGCCTCTACCTCAACAACATTCCTTTCGCCGACCACGGCGCCCTGCTCGACCCGTCGACGGAGGACCTGACCGGGCGCGGCCTCGAGCTCCTCGGCACGCTCGGGTACCGGAGCGATTTCGAGCCGGCGCAGCGTGCGCTCCACTTCCTCCGTCACACGCAGCGGCACGACGGCCCCTGGTACGGACGCTGGGGTGTGAACTACATCTACGGCACCTGGTCCGTCCTCCGCGGGCTCCGCGCGATCGGCGAGGACCTGCGTCACGAATACGTCCAGCGAGCGGTGCGCTGGCTCGAGCGTCACCAGAACCGTGACGGGGGCTGGGGCGAGACGTGCGAGAGCTACACCGACCCCGAGTTCGCCGGGGTCGGCGAGTCGACGCCCAGCCAGACGGCCTGGGCTCTGCTCGGCCTCTTCGCGGCCGAGCGCACGAGCGGCCGCGCCGTCGAGCGCGGCATCGAATACCTCCGCCGGACGCAGCGGAGCGACGGCGCGTGGGAGGACTGGCTCTGGAACGGGACGGGATTCCCGCGCGTCTTCTACCTCAAATATCACCTCTACGCGAAGTACTTTCCCCTCTGGGCACTGGGGATCTACCGCCGCGCTCAGGCATGA
PROTEIN sequence
Length: 640
MLPSGVVTVLDDAIARAQAYLLAHQAPDGHWIGELEADTTITSEYLLLGHLIDRIDRRKEAKAVQYLRREQLPDGGWSLFAGGPIDLSATIKAYFAMKLAGVSVDDPALVAARERIREMGGPVKANVFTKIQLALFGEYDWNGVPAMPVEIMLLPRPFFLFNIYEVSYWSRTVIVPLLIIMDRKPVKWLPPHLSLDELWPESREKTSLRFPRVPEPFSWRKLFWKNVFIAVDDGLKIWERFTTRPLRKRAVEAARVWLEERLAVPGGLGGIYPAMANSILAMRLLGYPDDHPLVLGQLKEIEALGVETDDALHYQPCPSPVWDTGLAINALIESGLPPEHAALRRAAEWLIDRQILVPGDWQVKRPHVRPGGWAFQYHNDFYPDLDDTAMVLMALEKVRGLDGDAVRLAKERGLGWFFGMQGEDGGWASFDADNNRLYLNNIPFADHGALLDPSTEDLTGRGLELLGTLGYRSDFEPAQRALHFLRHTQRHDGPWYGRWGVNYIYGTWSVLRGLRAIGEDLRHEYVQRAVRWLERHQNRDGGWGETCESYTDPEFAGVGESTPSQTAWALLGLFAAERTSGRAVERGIEYLRRTQRSDGAWEDWLWNGTGFPRVFYLKYHLYAKYFPLWALGIYRRAQA*