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13_1_40cm_scaffold_76332_5

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: comp(2085..2528)

Top 3 Functional Annotations

Value Algorithm Source
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 147.0
  • Bit_score: 223
  • Evalue 2.50e-55
3-dehydroquinate synthase (EC:4.2.3.4) similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 144.0
  • Bit_score: 101
  • Evalue 1.70e-19
Shikimate kinase id=4780140 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 148.0
  • Bit_score: 216
  • Evalue 1.70e-53

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 444
GGACGCTGCTTCGTGGAGACCGACGACATGATCGTCGCGCGCGAGGCGCGCTCGATCCCGGAAATCTTCCGCGCGGAGGGGGAGGAGCGCTTCCGCCAGCTCGAGACCGAGGCGCTCGAGGCACTCACGCTGAAATCGGGCGACGTGATCGCGACGGGCGGTGGCCTCCCGTGCCGCGAGGGACGCATGGAGGCCCTCCGCGCGCTCGGCACCGTCGTGTGGCTCGCGGGCGACCTCGCCGACCTCTGCGAGCGGGCGGGCCGGTCGGGAGACCGGCCCATGCTCGCGCGCCGGACCGTCGAGGAGCTCCGCGCGCTCTACCGCGCGCGCGAGCCCTTCTACCGGCGCGCGCACATCGTGGTCGACACGGGCGGGCTTGGCCCGGACCAGGTCGTCGCCCGTGTCCTGGCCGCGCTCAGAGGAACCCATGCCGAGCGCGTTTAG
PROTEIN sequence
Length: 148
GRCFVETDDMIVAREARSIPEIFRAEGEERFRQLETEALEALTLKSGDVIATGGGLPCREGRMEALRALGTVVWLAGDLADLCERAGRSGDRPMLARRTVEELRALYRAREPFYRRAHIVVDTGGLGPDQVVARVLAALRGTHAERV*