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13_1_40cm_scaffold_78211_3

Organism: 13_1_40CM_Rokubacteria_69_96

partial RP 40 / 55 MC: 1 BSCG 37 / 51 ASCG 10 / 38
Location: comp(2254..2649)

Top 3 Functional Annotations

Value Algorithm Source
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 158.0
  • Bit_score: 149
  • Evalue 4.10e-33
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 68.0
  • Bit_score: 111
  • Evalue 1.40e-22
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase id=4675083 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 158.0
  • Bit_score: 150
  • Evalue 1.00e-33

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 396
GTGACGCGAGTCGGCCTCGGCTTCGACCTCCATCCCCTGGTGGATGGCCGCCCCCTCGTCCTGGGTGGTGTCACGGTGCCGAGCGCCCGGGGCCTCGACGGCCATTCCGACGCCGACGTGCTGACGCATGCGATCGCCGAGGCGCTCCTGGGAGCGCTCGCGCTCGGGGACCTTGGCCGCCACTTCCCCGACGGTGACCCGCGGTACCGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGGCTGGCCGAAACGCTCGGGCTCGACGTGGATCGGGTGAGCGTGAAGGCCAAGAGTCCCGAGGGGCTTGGGCTCCTGGGGCGGCGCGAGGGCATCGCCGCGATGGCCGTCGCGAGCGTGGAGATCGCCACGTGA
PROTEIN sequence
Length: 132
VTRVGLGFDLHPLVDGRPLVLGGVTVPSARGLDGHSDADVLTHAIAEALLGALALGDLGRHFPDGDPRYRXXXXXXXXXXXXXXXXXRLAETLGLDVDRVSVKAKSPEGLGLLGRREGIAAMAVASVEIAT*