ggKbase home page

13_1_40cm_scaffold_1363_20

Organism: 13_1_40CM_Chloroflexi_66_19

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38
Location: comp(19221..19835)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=6 Tax=Synechocystis sp. PCC 6803 RepID=SIGA_SYNY3 similarity UNIREF
DB: UNIREF100
  • Identity: 32.5
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 2.50e-15
rpoDI; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 7.00e-16
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1147 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis sp. (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 3.50e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Synechocystis sp. PCC 6714 → Synechocystis → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGGGGCGCAGCGCGTGCATTCCGATGGCGACGACGCCGTGATGCGAGATCTGCGTCAGCAAGTGCGGACCACCCCGCCGCTTCAGGCGGGCGAGCAGGAGAGGTTGCTCGCGCGAATCGCCCTCGGTGACCGAGCAAGCCAGGATCGCCTCGTCGCGACCAACCTCGCCATGGTGATCCGAATGGCGGAAGCTCGCCGGGAGCGAGGCCTTTCCGTTTCTGACCTCGTCTTGGAAGGATCTTTGGGTTTCCTCGAGGCCATGAACACGTTTGTTCAGAGCAAGAGCGCGGACTTCATCGCGTTCGCCGAACGCAAGGTCGGCGACCAGATGGACACCGCGATCGCCTCCGAGGCCGCCGCAGTCCGCGACGCGGAGCTGCTCGTCGCGGCCGCGACCGACTACGAGCGCACCGAGCTCTTACTCGCCAGGGTCCTGCGGCGCGCACCGATGGAAGCCGAGATCGCGGAAAAGCTCGAATGGACCGTCGAGCGCACCCGTTATGTGGCGCAGGTCGTCGCCGAAGCAAGGCGTCGCCATGACGAGGAGCTGCTCGCCTTCATCGACCCTGAGGCTCTCGACCCCGAAGCGTTCGACGACGCAGTTGACGGCTAG
PROTEIN sequence
Length: 205
MGAQRVHSDGDDAVMRDLRQQVRTTPPLQAGEQERLLARIALGDRASQDRLVATNLAMVIRMAEARRERGLSVSDLVLEGSLGFLEAMNTFVQSKSADFIAFAERKVGDQMDTAIASEAAAVRDAELLVAAATDYERTELLLARVLRRAPMEAEIAEKLEWTVERTRYVAQVVAEARRRHDEELLAFIDPEALDPEAFDDAVDG*