ggKbase home page

13_1_40cm_scaffold_3569_3

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(1339..1815)

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein, FmdB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 122.0
  • Bit_score: 188
  • Evalue 5.60e-45
Putative regulatory protein, FmdB id=4119982 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 125.0
  • Bit_score: 167
  • Evalue 9.50e-39
regulatory protein, FmdB similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 114.0
  • Bit_score: 140
  • Evalue 3.50e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCCGCAGGGCCACTCGTGCGACGACGTGGCACCCCGAGTCAGGAGTGTCGTCACCGAGACACGCGTGACCAGCGTGCTAAACTTCGGCGGGATGCCCATCTACGAGTACGACTGTCGCGACTGCCGCCGCGTCGTCAGCATCCTCGTCCTTCGCCCGTCAGCGGCCGCGGCGCCTACGTGTCCTCGCTGCGGCGGTTCCGCGCTCAACCGCGTCATGTCACGCTTCGCCACGGTGAAGTCCGAGGAAGCGCGTCTGGAGTCTCTCGCCGATCCCGCGTCGCTCGGCGATCTCGACGAGAACGATCCCGCCAGCATGGGCCGGTTCATGAAGCGCATGGGCCGGGAGATGGGCGACGAGCTGGGCGACGACTTCAACGAGGCGGTCGACGAAGCGATGGCCGAGGAGAGCGGTACCGACGGCGACGCCGAGGCCGCCCCGGGGTCGGCCGCCGATTCCTCGCTCGGCGATCTGTGA
PROTEIN sequence
Length: 159
MPQGHSCDDVAPRVRSVVTETRVTSVLNFGGMPIYEYDCRDCRRVVSILVLRPSAAAAPTCPRCGGSALNRVMSRFATVKSEEARLESLADPASLGDLDENDPASMGRFMKRMGREMGDELGDDFNEAVDEAMAEESGTDGDAEAAPGSAADSSLGDL*