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13_1_40cm_scaffold_416_16

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(12046..12666)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 200.0
  • Bit_score: 293
  • Evalue 2.10e-76
ECF subfamily RNA polymerase sigma factor id=4751264 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 196.0
  • Bit_score: 264
  • Evalue 7.50e-68
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 197.0
  • Bit_score: 146
  • Evalue 6.40e-33

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGAGCGTGGCGAACCGGGCTCGCGTGGACACCGATGCCGACCTCGTCGCCGCTCTGCGTCGTGACGACGCGGGCGCCATGGACCGGCTCGTCGAAACGTACGCCGACCGCGTCTACCGCTTGGCGGTGCGGATCACAGGTTCGCGGGAGGATGCCGAGGAAGTGGTCCAGGACGCGCTGTGGACGGTCGGTCGGAAGATCAACACGTTCAAGGGCGAGTCGGCCTTCGGGTCCTGGCTCTACCGCATCGCAGCGAACGCGGCCTACATGAAGCTACGGGCTCGCCGGGGAAAGGGACGAGAAATCGCCCTCGACGACGTGCTGCCGGCGCTCGACTCCGGCGGGATTCACTTCGAGCCGATGGACGACTGGTCGGTGCGCGTCGACGACCGCGCCCTCCAGGGTGAACTGCGGAAGGTGCTGGATTCCGCCATCGCCGAGCTGCCGTCGGACTATCGGACGGCGCTTGTCCTGCACGACGTCGAAGGCCTGTCCAATCCCGACATCGCCGACACCCTCGGGATCAGTCTGCCCGCAGTGAAGTCGCGCGTGCACCGGTCGCGTCTGTTCCTCCGTAAGCGGCTATCCGAATACATGAATGACGGTGCTGCCCGTACCTGA
PROTEIN sequence
Length: 207
MSVANRARVDTDADLVAALRRDDAGAMDRLVETYADRVYRLAVRITGSREDAEEVVQDALWTVGRKINTFKGESAFGSWLYRIAANAAYMKLRARRGKGREIALDDVLPALDSGGIHFEPMDDWSVRVDDRALQGELRKVLDSAIAELPSDYRTALVLHDVEGLSNPDIADTLGISLPAVKSRVHRSRLFLRKRLSEYMNDGAART*