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13_1_40cm_scaffold_416_31

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 24794..25495

Top 3 Functional Annotations

Value Algorithm Source
rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 230.0
  • Bit_score: 251
  • Evalue 1.00e-63
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 228.0
  • Bit_score: 217
  • Evalue 2.00e-53
two component, sigma54 specific, fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 153.0
  • Bit_score: 92
  • Evalue 1.60e-16

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCGGGTGCTGGTCGTCGAGGACGAGCCGGATGTCAGCGCCGTCTTTCGCGACTTCCTGATCGAGCTTGGTCACGAGGCGGTTCCTGTCCGCAGCGCCGAGGCGGCCCTGGTAACCCTCGAGCGCGAGCGACCGGATGCGATCATCCTCGACATCCACCTCCCTGGGCTGAGCGGCCTCGATTTCCTCCAGCTCGCGCCGGTTCGTGACTCGGGTCTGCCAATCATCGCCGTGTCGGGCGTGGCCACCGAGAGTCAGGCCCGCGAGTGCTTGCGCCTCGGCGCATTCGACTTCCTCGGTAAGCCGGTGGCCTTCGATCGCCTGGGCGAGGTGCTGGCAACCCTGGAGCCGCACGCGCTGCACCGGCAGCTGTCGCTCGTGGGCCGAAGTCCGGAGCGCCGGCGCGCGGCACGCATCGAGGTGGTCTTCCCCATCCGGATCCTGCAATTCCATGGTGCCGAGTGGCAAGGATGGGCTCACGACCTGAGTCCTTTCGGGGTCAAGGTCAAGGGTGATGCGACCTTGCAGCCGGGCGAGGCGGTGAAGCTCTCGTTCACGCTCCCCGACGGCGGACCGCCTGTACGCGTCAGCTCGCTGGTGTTGAGAACGGACCGGGGCGGGCAAGCCTTCTACTTCGTGAATCTCACCGCGCAGGACTTCGAACGACTCGGGGAGTTCACCCGCCGGCACCTGACCCTGTGA
PROTEIN sequence
Length: 234
MRVLVVEDEPDVSAVFRDFLIELGHEAVPVRSAEAALVTLERERPDAIILDIHLPGLSGLDFLQLAPVRDSGLPIIAVSGVATESQARECLRLGAFDFLGKPVAFDRLGEVLATLEPHALHRQLSLVGRSPERRRAARIEVVFPIRILQFHGAEWQGWAHDLSPFGVKVKGDATLQPGEAVKLSFTLPDGGPPVRVSSLVLRTDRGGQAFYFVNLTAQDFERLGEFTRRHLTL*