ggKbase home page

13_1_40cm_scaffold_465_22

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(17098..17364)

Top 3 Functional Annotations

Value Algorithm Source
rbpA; RNA-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 88.0
  • Bit_score: 140
  • Evalue 9.70e-31
RNP-1 like RNA-binding protein id=1884756 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 88.0
  • Bit_score: 104
  • Evalue 7.30e-20
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 88.0
  • Bit_score: 92
  • Evalue 4.70e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCCGTCAAGCTCTTCGTCGGTGGTCTCGCCTTCGCTACATCGTCGGATCGGTTGCGGGAAGCGTTCGCGACGATAGGGACCGTGGCATCCGTGCGCGTCGTCAAGGATCCTGCGGGCCAGTCTCGCGGCTTCGGCTTTGTCGAGATGGAGACGATGGAGGAAGCTCAACACGCGATCAGCCGCCTGCATGGCAGCGATCTCGACGGACGGGCCCTCAAAGTCGAGTTGTCCCAGAAGAAAGACCCGAGCGGAGCCGGGCGGTGA
PROTEIN sequence
Length: 89
MAVKLFVGGLAFATSSDRLREAFATIGTVASVRVVKDPAGQSRGFGFVEMETMEEAQHAISRLHGSDLDGRALKVELSQKKDPSGAGR*