ggKbase home page

13_1_40cm_scaffold_483_14

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: 11845..13104

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 409.0
  • Bit_score: 671
  • Evalue 5.80e-190
ABC-type branched-chain amino acid transport system, periplasmic component id=4288054 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 409.0
  • Bit_score: 671
  • Evalue 7.00e-190
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 408.0
  • Bit_score: 314
  • Evalue 4.70e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGACGACACGCAGACAGTTCCTCACGATCGCCACCATGGCCACCACCGCGCTGGGCGGGCCCCGGCTGCTACGCGCGCAGCCCAAGGAAATCCTCGTCGGCGAGACACATCCGCTGACGGGCGGATTCGCCCGGGAGGGTAACTTCGGCAAGCAGGGCATCGAGCTGGCGGTGAACGAGATCAACGCGGCGGGTGGCATCAAGTCCATGGGCGGCGCCAGGCTCAAGCTCATGGTCCTCGACAACGAGTCGAAGCCGCCGGTCGCCATTTCCACGATGGAGCGGCTGAAGGACGCCGGAGTCGTCGCCGTCCTCGGGCCCTACGCGTCCGGCCTGGCTTTCGTCACCACCCAGGAGGCCGAGAAGTACAGGATCCCGCACCTGCTCGACGTCGCCATCGCCGACCAGATCACCGAGCGCGGTTTCACGTACACGTTCAGGTTCAGCCCGACGGCCGGGATGGGAGCCAGGCAGACGGTAGAGTACCTCGGTGGGCTGACGCGGGACATGAAGCTGCCCTTCAAGCGGGTCGTGATCATCCACGAAGACGGCCTCTTCGGGAAATCGACGGCCGATACGCTGCAGAGGCTGTTGCCGACGATCGGGATGGAGGTCGTCGAGCGCATCCCTCACAACGCCGGCGCGCCCTCACTCAGCAACGAAGTGCTGAAGATCAAGGCGGCCAAGGCTGACGTCGTCATCCCGTCGACCTACTACCCGGCCCACTCGCTGATCATCCGCACCATGGCCGAGCAGCGAGTGGACACCGGGGCGATCGTGTCCGTCTATGGCGGCGCGGGCAGCCAGTACCGCTTCATCAAGGACGTCGGCAAGCTCGCCGACCACATGCTCGACGGCAACCACTGGTACAACCCGAAGCACCCGCGGATCAAGTCGGTGATCGCCGCCTTCGACAAGGCGTACCAGCAGCCGTTCGCCTACGAGTGGATGCTGGCCTACCAGTCGGCGTGGGTGCTGAAGGACGCGCTCGAGCGGGCCGGCGGGGCCGATCGCGAGAGGCTGCGTGACGCGCTGGCCCGGACGAACCTCAAGGATCAGATCGTGCCCTACCCGATCGTCTTCGACGACCACGGACAGAACACGCAGGCCCGCGCGCTGCTGATGCAAGTGCAGAGCGGCACCATCGCGGTCGTCTACCCGTCCGACGTCGCCGAGGCGAAGGCGATCCTTCCCGTGCCGGCCTGGGAGAAGCGAATGCGACTCTCGAGGTCGTCCTCGCCAGCCTCGTCAACGGGGTGA
PROTEIN sequence
Length: 420
MTTRRQFLTIATMATTALGGPRLLRAQPKEILVGETHPLTGGFAREGNFGKQGIELAVNEINAAGGIKSMGGARLKLMVLDNESKPPVAISTMERLKDAGVVAVLGPYASGLAFVTTQEAEKYRIPHLLDVAIADQITERGFTYTFRFSPTAGMGARQTVEYLGGLTRDMKLPFKRVVIIHEDGLFGKSTADTLQRLLPTIGMEVVERIPHNAGAPSLSNEVLKIKAAKADVVIPSTYYPAHSLIIRTMAEQRVDTGAIVSVYGGAGSQYRFIKDVGKLADHMLDGNHWYNPKHPRIKSVIAAFDKAYQQPFAYEWMLAYQSAWVLKDALERAGGADRERLRDALARTNLKDQIVPYPIVFDDHGQNTQARALLMQVQSGTIAVVYPSDVAEAKAILPVPAWEKRMRLSRSSSPASSTG*